T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 23999..33089
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP87_RS23900 (PQP87_23900) | 19018..19197 | + | 180 | Protein_31 | helix-turn-helix domain-containing protein | - |
| PQP87_RS23905 (PQP87_23905) | 19262..19966 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| PQP87_RS23910 (PQP87_23910) | 19912..20493 | - | 582 | WP_058663077 | lipocalin family protein | - |
| PQP87_RS23915 (PQP87_23915) | 20587..21732 | - | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| PQP87_RS23920 (PQP87_23920) | 22056..23318 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| PQP87_RS23925 (PQP87_23925) | 23603..23995 | - | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| PQP87_RS23930 (PQP87_23930) | 23999..24577 | - | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| PQP87_RS23935 (PQP87_23935) | 24574..25887 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| PQP87_RS23940 (PQP87_23940) | 25887..26804 | - | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| PQP87_RS23945 (PQP87_23945) | 26788..27414 | - | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| PQP87_RS23950 (PQP87_23950) | 27411..27692 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| PQP87_RS23955 (PQP87_23955) | 27837..28202 | - | 366 | WP_001052530 | hypothetical protein | - |
| PQP87_RS23960 (PQP87_23960) | 28538..29200 | - | 663 | WP_001231464 | hypothetical protein | - |
| PQP87_RS23965 (PQP87_23965) | 29200..29577 | - | 378 | WP_000869297 | hypothetical protein | - |
| PQP87_RS23970 (PQP87_23970) | 29587..30033 | - | 447 | WP_000122507 | hypothetical protein | - |
| PQP87_RS23975 (PQP87_23975) | 30043..30672 | - | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| PQP87_RS23980 (PQP87_23980) | 30629..31174 | - | 546 | WP_000228720 | hypothetical protein | - |
| PQP87_RS23985 (PQP87_23985) | 31224..33089 | - | 1866 | WP_077779971 | conjugative transfer system coupling protein TraD | virb4 |
| PQP87_RS23990 (PQP87_23990) | 33086..36058 | - | 2973 | WP_001326173 | MobH family relaxase | - |
| PQP87_RS23995 (PQP87_23995) | 36226..36843 | + | 618 | WP_001249395 | hypothetical protein | - |
| PQP87_RS24000 (PQP87_24000) | 36825..37058 | + | 234 | WP_001191890 | hypothetical protein | - |