T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48239..57329
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP93_RS24005 (PQP93_24005) | 44270..44503 | - | 234 | WP_001191890 | hypothetical protein | - |
| PQP93_RS24010 (PQP93_24010) | 44485..45102 | - | 618 | WP_001249395 | hypothetical protein | - |
| PQP93_RS24015 (PQP93_24015) | 45270..48242 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| PQP93_RS24020 (PQP93_24020) | 48239..50104 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| PQP93_RS24025 (PQP93_24025) | 50154..50699 | + | 546 | WP_000228720 | hypothetical protein | - |
| PQP93_RS24030 (PQP93_24030) | 50656..51285 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| PQP93_RS24035 (PQP93_24035) | 51295..51741 | + | 447 | WP_000122507 | hypothetical protein | - |
| PQP93_RS24040 (PQP93_24040) | 51751..52128 | + | 378 | WP_000869297 | hypothetical protein | - |
| PQP93_RS24045 (PQP93_24045) | 52128..52790 | + | 663 | WP_001231464 | hypothetical protein | - |
| PQP93_RS24050 (PQP93_24050) | 53126..53491 | + | 366 | WP_001052530 | hypothetical protein | - |
| PQP93_RS24055 (PQP93_24055) | 53636..53917 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| PQP93_RS24060 (PQP93_24060) | 53914..54540 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| PQP93_RS24065 (PQP93_24065) | 54524..55441 | + | 918 | WP_274890347 | type-F conjugative transfer system secretin TraK | traK |
| PQP93_RS24070 (PQP93_24070) | 55441..56754 | + | 1314 | WP_274890352 | TraB/VirB10 family protein | traB |
| PQP93_RS24075 (PQP93_24075) | 56751..57329 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| PQP93_RS24080 (PQP93_24080) | 57333..57725 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| PQP93_RS24085 (PQP93_24085) | 58010..59272 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| PQP93_RS24090 (PQP93_24090) | 59596..60741 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| PQP93_RS24095 (PQP93_24095) | 60835..61368 | + | 534 | WP_001221666 | lipocalin family protein | - |
| PQP93_RS24100 (PQP93_24100) | 61365..61682 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PQP93_RS24405 | 61939..62304 | + | 366 | Protein_86 | LuxR family transcriptional regulator | - |