T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 24985..51340
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ15_RS23790 (PQQ15_23790) | 24351..24578 | + | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |
| PQQ15_RS23795 (PQQ15_23795) | 24578..24976 | + | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| PQQ15_RS23800 (PQQ15_23800) | 24985..27147 | - | 2163 | WP_084568444 | type IV conjugative transfer system coupling protein TraD | virb4 |
| PQQ15_RS23805 (PQQ15_23805) | 27524..28255 | - | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| PQQ15_RS23810 (PQQ15_23810) | 28291..28785 | - | 495 | WP_010999946 | entry exclusion protein | - |
| PQQ15_RS23815 (PQQ15_23815) | 28801..31623 | - | 2823 | WP_001007086 | conjugal transfer mating-pair stabilization protein TraG | traG |
| PQQ15_RS23820 (PQQ15_23820) | 31620..33002 | - | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| PQQ15_RS23825 (PQQ15_23825) | 32992..33540 | - | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| PQQ15_RS23830 (PQQ15_23830) | 33527..33820 | - | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PQQ15_RS23835 (PQQ15_23835) | 34034..34783 | - | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| PQQ15_RS23840 (PQQ15_23840) | 34795..35010 | - | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| PQQ15_RS23845 (PQQ15_23845) | 35021..36847 | - | 1827 | WP_000827528 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| PQQ15_RS23850 (PQQ15_23850) | 36844..37263 | - | 420 | WP_001229397 | HNH endonuclease | - |
| PQQ15_RS23855 (PQQ15_23855) | 37300..37938 | - | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| PQQ15_RS23860 (PQQ15_23860) | 37923..38230 | - | 308 | Protein_41 | hypothetical protein | - |
| PQQ15_RS23865 (PQQ15_23865) | 38249..39241 | - | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
| PQQ15_RS23870 (PQQ15_23870) | 39238..39870 | - | 633 | WP_000871995 | type-F conjugative transfer system protein TraW | traW |
| PQQ15_RS23875 (PQQ15_23875) | 39867..40253 | - | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| PQQ15_RS23880 (PQQ15_23880) | 40228..42876 | - | 2649 | WP_274882989 | type IV secretion system protein TraC | virb4 |
| PQQ15_RS23885 (PQQ15_23885) | 42892..43155 | - | 264 | WP_001239255 | hypothetical protein | - |
| PQQ15_RS23890 (PQQ15_23890) | 43272..43739 | - | 468 | WP_000549562 | hypothetical protein | - |
| PQQ15_RS23895 (PQQ15_23895) | 43732..43953 | - | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| PQQ15_RS23900 (PQQ15_23900) | 44088..44603 | - | 516 | WP_274882992 | type IV conjugative transfer system lipoprotein TraV | traV |
| PQQ15_RS23905 (PQQ15_23905) | 44600..44845 | - | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| PQQ15_RS23910 (PQQ15_23910) | 44823..45419 | - | 597 | WP_000527896 | conjugal transfer pilus-stabilizing protein TraP | - |
| PQQ15_RS23915 (PQQ15_23915) | 45409..46830 | - | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PQQ15_RS23920 (PQQ15_23920) | 46830..47570 | - | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| PQQ15_RS23925 (PQQ15_23925) | 47557..48123 | - | 567 | WP_000399768 | type IV conjugative transfer system protein TraE | traE |
| PQQ15_RS23930 (PQQ15_23930) | 48145..48456 | - | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| PQQ15_RS23935 (PQQ15_23935) | 48471..48833 | - | 363 | WP_001274201 | type IV conjugative transfer system pilin TraA | - |
| PQQ15_RS23940 (PQQ15_23940) | 48875..49102 | - | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| PQQ15_RS23945 (PQQ15_23945) | 49196..49882 | - | 687 | WP_000336297 | PAS domain-containing protein | - |
| PQQ15_RS23950 (PQQ15_23950) | 50075..50455 | - | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PQQ15_RS23955 (PQQ15_23955) | 50870..51340 | + | 471 | WP_001526856 | transglycosylase SLT domain-containing protein | virB1 |
| PQQ15_RS23960 (PQQ15_23960) | 51651..52469 | - | 819 | Protein_61 | DUF932 domain-containing protein | - |
| PQQ15_RS23965 (PQQ15_23965) | 52572..52730 | - | 159 | WP_001704449 | hypothetical protein | - |
| PQQ15_RS23970 (PQQ15_23970) | 52816..52944 | - | 129 | WP_000372429 | hypothetical protein | - |
| PQQ15_RS23975 (PQQ15_23975) | 52979..53716 | - | 738 | WP_000581933 | plasmid SOS inhibition protein A | - |
| PQQ15_RS23980 (PQQ15_23980) | 53713..54147 | - | 435 | WP_010999943 | conjugation system SOS inhibitor PsiB | - |
| PQQ15_RS23985 (PQQ15_23985) | 54187..56184 | - | 1998 | WP_000117513 | ParB/RepB/Spo0J family partition protein | - |