T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 52547..61637
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ12_RS24660 (PQQ12_24660) | 48578..48811 | - | 234 | WP_001191890 | hypothetical protein | - |
| PQQ12_RS24665 (PQQ12_24665) | 48793..49410 | - | 618 | WP_001249395 | hypothetical protein | - |
| PQQ12_RS24670 (PQQ12_24670) | 49578..52550 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| PQQ12_RS24675 (PQQ12_24675) | 52547..54412 | + | 1866 | WP_077779971 | conjugative transfer system coupling protein TraD | virb4 |
| PQQ12_RS24680 (PQQ12_24680) | 54462..55007 | + | 546 | WP_000228720 | hypothetical protein | - |
| PQQ12_RS24685 (PQQ12_24685) | 54964..55593 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| PQQ12_RS24690 (PQQ12_24690) | 55603..56049 | + | 447 | WP_000122507 | hypothetical protein | - |
| PQQ12_RS24695 (PQQ12_24695) | 56059..56436 | + | 378 | WP_000869297 | hypothetical protein | - |
| PQQ12_RS24700 (PQQ12_24700) | 56436..57098 | + | 663 | WP_001231464 | hypothetical protein | - |
| PQQ12_RS24705 (PQQ12_24705) | 57434..57799 | + | 366 | WP_001052530 | hypothetical protein | - |
| PQQ12_RS24710 (PQQ12_24710) | 57944..58225 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| PQQ12_RS24715 (PQQ12_24715) | 58222..58848 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| PQQ12_RS24720 (PQQ12_24720) | 58832..59749 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| PQQ12_RS24725 (PQQ12_24725) | 59749..61062 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| PQQ12_RS24730 (PQQ12_24730) | 61059..61637 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| PQQ12_RS24735 (PQQ12_24735) | 61641..62033 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| PQQ12_RS24740 (PQQ12_24740) | 62318..63580 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| PQQ12_RS24745 (PQQ12_24745) | 63904..65049 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| PQQ12_RS24750 (PQQ12_24750) | 65143..65724 | + | 582 | WP_058663077 | lipocalin family protein | - |
| PQQ12_RS24755 (PQQ12_24755) | 65670..66374 | - | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |