T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48241..57331
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP78_RS23940 (PQP78_23940) | 44272..44505 | - | 234 | WP_001191890 | hypothetical protein | - |
| PQP78_RS23945 (PQP78_23945) | 44487..45104 | - | 618 | WP_001249395 | hypothetical protein | - |
| PQP78_RS23950 (PQP78_23950) | 45272..48244 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| PQP78_RS23955 (PQP78_23955) | 48241..50106 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| PQP78_RS23960 (PQP78_23960) | 50156..50701 | + | 546 | WP_000228720 | hypothetical protein | - |
| PQP78_RS23965 (PQP78_23965) | 50658..51287 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| PQP78_RS23970 (PQP78_23970) | 51297..51743 | + | 447 | WP_274892029 | hypothetical protein | - |
| PQP78_RS23975 (PQP78_23975) | 51753..52130 | + | 378 | WP_000869297 | hypothetical protein | - |
| PQP78_RS23980 (PQP78_23980) | 52130..52792 | + | 663 | WP_001231464 | hypothetical protein | - |
| PQP78_RS23985 (PQP78_23985) | 53128..53493 | + | 366 | WP_001052530 | hypothetical protein | - |
| PQP78_RS23990 (PQP78_23990) | 53638..53919 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| PQP78_RS23995 (PQP78_23995) | 53916..54542 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| PQP78_RS24000 (PQP78_24000) | 54526..55443 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| PQP78_RS24005 (PQP78_24005) | 55443..56756 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| PQP78_RS24010 (PQP78_24010) | 56753..57331 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| PQP78_RS24015 (PQP78_24015) | 57335..57727 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| PQP78_RS24020 (PQP78_24020) | 58012..59274 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| PQP78_RS24025 (PQP78_24025) | 59598..60743 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| PQP78_RS24030 (PQP78_24030) | 60837..61370 | + | 534 | WP_001221666 | lipocalin family protein | - |
| PQP78_RS24035 (PQP78_24035) | 61367..61684 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PQP78_RS24580 | 61941..62306 | + | 366 | Protein_86 | LuxR family transcriptional regulator | - |