T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48363..57453
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP98_RS23740 (PQP98_23740) | 44394..44627 | - | 234 | WP_001191890 | hypothetical protein | - |
| PQP98_RS23745 (PQP98_23745) | 44609..45226 | - | 618 | WP_001249395 | hypothetical protein | - |
| PQP98_RS23750 (PQP98_23750) | 45394..48366 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| PQP98_RS23755 (PQP98_23755) | 48363..50228 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| PQP98_RS23760 (PQP98_23760) | 50278..50823 | + | 546 | WP_000228720 | hypothetical protein | - |
| PQP98_RS23765 (PQP98_23765) | 50780..51409 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| PQP98_RS23770 (PQP98_23770) | 51419..51865 | + | 447 | WP_000122507 | hypothetical protein | - |
| PQP98_RS23775 (PQP98_23775) | 51875..52252 | + | 378 | WP_000869297 | hypothetical protein | - |
| PQP98_RS23780 (PQP98_23780) | 52252..52914 | + | 663 | WP_001231464 | hypothetical protein | - |
| PQP98_RS23785 (PQP98_23785) | 53250..53615 | + | 366 | WP_001052530 | hypothetical protein | - |
| PQP98_RS23790 (PQP98_23790) | 53760..54041 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| PQP98_RS23795 (PQP98_23795) | 54038..54664 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| PQP98_RS23800 (PQP98_23800) | 54648..55565 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| PQP98_RS23805 (PQP98_23805) | 55565..56878 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| PQP98_RS23810 (PQP98_23810) | 56875..57453 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| PQP98_RS23815 (PQP98_23815) | 57457..57849 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| PQP98_RS23820 (PQP98_23820) | 58134..59396 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| PQP98_RS23825 (PQP98_23825) | 59720..60865 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| PQP98_RS23830 (PQP98_23830) | 60959..61492 | + | 534 | WP_001221666 | lipocalin family protein | - |
| PQP98_RS23835 (PQP98_23835) | 61489..61806 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PQP98_RS24155 | 62063..62428 | + | 366 | Protein_86 | LuxR family transcriptional regulator | - |