T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 45893..71701
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DE22_RS23105 (DE22_23110) | 41884..42318 | + | 435 | WP_000845922 | conjugation system SOS inhibitor PsiB | - |
| DE22_RS23110 (DE22_23115) | 42315..43101 | + | 787 | Protein_45 | plasmid SOS inhibition protein A | - |
| DE22_RS23115 (DE22_23120) | 43291..43404 | + | 114 | Protein_46 | DUF5431 family protein | - |
| DE22_RS23120 (DE22_23125) | 43349..43471 | + | 123 | WP_223195199 | Hok/Gef family protein | - |
| DE22_RS23125 (DE22_23130) | 43772..44069 | - | 298 | Protein_48 | hypothetical protein | - |
| DE22_RS23130 (DE22_23135) | 44370..44657 | + | 288 | WP_000107520 | hypothetical protein | - |
| DE22_RS23135 (DE22_23140) | 44776..45597 | + | 822 | WP_001234468 | DUF932 domain-containing protein | - |
| DE22_RS23140 (DE22_23145) | 45893..46402 | - | 510 | WP_000759163 | transglycosylase SLT domain-containing protein | virB1 |
| DE22_RS23145 (DE22_23150) | 46817..47200 | + | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| DE22_RS23150 (DE22_23155) | 47387..48076 | + | 690 | WP_000283385 | conjugal transfer transcriptional regulator TraJ | - |
| DE22_RS23155 (DE22_23160) | 48175..48570 | + | 396 | WP_001309237 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| DE22_RS23160 (DE22_23165) | 48603..48968 | + | 366 | WP_000994779 | type IV conjugative transfer system pilin TraA | - |
| DE22_RS23165 (DE22_23170) | 48983..49294 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| DE22_RS23170 (DE22_23175) | 49316..49882 | + | 567 | WP_000399785 | type IV conjugative transfer system protein TraE | traE |
| DE22_RS23175 (DE22_23180) | 49869..50597 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| DE22_RS23180 (DE22_23185) | 50597..52024 | + | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| DE22_RS23185 (DE22_23190) | 52014..52604 | + | 591 | WP_000002796 | conjugal transfer pilus-stabilizing protein TraP | - |
| DE22_RS23190 (DE22_23195) | 52591..52788 | + | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| DE22_RS23195 (DE22_23200) | 52800..53051 | + | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| DE22_RS23200 (DE22_23205) | 53048..53563 | + | 516 | WP_000809841 | type IV conjugative transfer system lipoprotein TraV | traV |
| DE22_RS23205 (DE22_23210) | 53698..53919 | + | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| DE22_RS23210 (DE22_23215) | 54079..56706 | + | 2628 | WP_001064251 | type IV secretion system protein TraC | virb4 |
| DE22_RS23215 (DE22_23220) | 56703..57089 | + | 387 | WP_000214082 | type-F conjugative transfer system protein TrbI | - |
| DE22_RS23220 (DE22_23225) | 57086..57718 | + | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| DE22_RS23225 (DE22_23230) | 57715..58707 | + | 993 | WP_000830839 | conjugal transfer pilus assembly protein TraU | traU |
| DE22_RS23230 (DE22_23235) | 58716..59354 | + | 639 | WP_022630459 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| DE22_RS23235 (DE22_23240) | 59351..61159 | + | 1809 | WP_000821846 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| DE22_RS23240 (DE22_23245) | 61186..61443 | + | 258 | WP_000864325 | conjugal transfer protein TrbE | - |
| DE22_RS23245 (DE22_23250) | 61436..62179 | + | 744 | WP_001030389 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| DE22_RS23250 (DE22_23255) | 62195..62542 | + | 348 | WP_001287676 | conjugal transfer protein TrbA | - |
| DE22_RS23255 (DE22_23260) | 62661..62945 | + | 285 | WP_000624110 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DE22_RS23260 (DE22_23265) | 62932..63477 | + | 546 | WP_000052618 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| DE22_RS23265 (DE22_23270) | 63407..63769 | + | 363 | WP_071779407 | P-type conjugative transfer protein TrbJ | - |
| DE22_RS23270 (DE22_23275) | 63766..65142 | + | 1377 | WP_000982833 | conjugal transfer pilus assembly protein TraH | traH |
| DE22_RS23275 (DE22_23280) | 65139..67961 | + | 2823 | WP_001007012 | conjugal transfer mating-pair stabilization protein TraG | traG |
| DE22_RS23280 (DE22_23285) | 67976..68479 | + | 504 | WP_000605510 | hypothetical protein | - |
| DE22_RS23285 (DE22_23290) | 68511..69242 | + | 732 | WP_001447147 | conjugal transfer complement resistance protein TraT | - |
| DE22_RS23290 (DE22_23295) | 69494..71701 | + | 2208 | WP_000009364 | type IV conjugative transfer system coupling protein TraD | virb4 |