T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3707..14675
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| pKJK5_1 | 1315..2538 | - | 1224 | CAK02642 | replication initiation protein | - |
| pKJK5_2 | 2590..2931 | - | 342 | CAK02643 | single strand DNA binding protein | - |
| pKJK5_3 | 3043..3417 | + | 375 | CAK02644 | transcriptional regulator protein | - |
| pKJK5_4 | 3707..4669 | + | 963 | CAK02645 | TrbB protein | virB11 |
| pKJK5_5 | 4683..5147 | + | 465 | CAK02646 | putative prepilin | virB2 |
| pKJK5_6 | 5151..5462 | + | 312 | CAK02647 | TrbD protein | virB3 |
| pKJK5_7 | 5459..8017 | + | 2559 | CAK02648 | TrbE protien | virb4 |
| pKJK5_8 | 8014..8787 | + | 774 | CAK02649 | TrbF protein | virB8 |
| pKJK5_9 | 8805..9698 | + | 894 | CAK02650 | TrbG protein | virB9 |
| pKJK5_10 | 9701..10156 | + | 456 | CAK02651 | TrbH protein | - |
| pKJK5_11 | 10160..11563 | + | 1404 | CAK02652 | TrbI protein | virB10 |
| pKJK5_12 | 11582..12352 | + | 771 | CAK02653 | TrbJ protein | virB5 |
| pKJK5_13 | 12362..12535 | + | 174 | CAK02654 | TrbK protein | - |
| pKJK5_14 | 12520..12747 | + | 228 | CAK02655 | hypothetical protein predicted by Glimmer/Critica | - |
| pKJK5_15 | 12759..14675 | + | 1917 | CAK02656 | TrbL protein | virB6 |
| pKJK5_16 | 14711..15298 | + | 588 | CAK02657 | TrbM protein | - |
| pKJK5_17 | 15315..15944 | + | 630 | CAK02658 | TrbN protein | - |
| pKJK5_18 | 15973..16242 | + | 270 | CAK02659 | TrbO protein | - |
| pKJK5_19 | 16239..16937 | + | 699 | CAK02660 | TrbP protein | - |
| pKJK5_20 | 16952..17383 | + | 432 | CAK02661 | putative outer membrane protein | - |
| pKJK5_21 | 17426..17839 | + | 414 | CAK02662 | putative major outer membrane lipoprotein | - |
| pKJK5_22 | 17865..18833 | + | 969 | CAK02663 | hypothetical protein | - |
| pKJK5_23 | 18816..19421 | - | 606 | CAK02664 | plasmid stablization protein ParA, resolvase | - |