T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 42802..68097
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D6D46_RS18925 (D6D46_19020) | 42802..45018 | - | 2217 | WP_065813483 | type IV conjugative transfer system coupling protein TraD | virb4 |
| D6D46_RS18935 (D6D46_19030) | 45271..46002 | - | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| D6D46_RS18940 (D6D46_19035) | 46034..46537 | - | 504 | WP_053320762 | surface exclusion protein | - |
| D6D46_RS18945 (D6D46_19040) | 46552..49374 | - | 2823 | WP_053320755 | conjugal transfer mating-pair stabilization protein TraG | traG |
| D6D46_RS18950 (D6D46_19045) | 49371..50744 | - | 1374 | WP_065800514 | conjugal transfer pilus assembly protein TraH | traH |
| D6D46_RS18955 (D6D46_19050) | 50744..51106 | - | 363 | WP_001443292 | P-type conjugative transfer protein TrbJ | - |
| D6D46_RS18960 (D6D46_19055) | 51036..51581 | - | 546 | WP_000052618 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| D6D46_RS18965 (D6D46_19060) | 51568..51804 | - | 237 | WP_001346259 | type-F conjugative transfer system pilin chaperone TraQ | - |
| D6D46_RS18970 (D6D46_19065) | 51965..52708 | - | 744 | WP_001030376 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| D6D46_RS18975 (D6D46_19070) | 52701..52961 | - | 261 | WP_000864348 | conjugal transfer protein TrbE | - |
| D6D46_RS18980 (D6D46_19075) | 52988..54796 | - | 1809 | WP_000821845 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| D6D46_RS18985 (D6D46_19080) | 54793..55431 | - | 639 | WP_000777691 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| D6D46_RS18990 (D6D46_19085) | 55440..56432 | - | 993 | WP_053320745 | conjugal transfer pilus assembly protein TraU | traU |
| D6D46_RS18995 (D6D46_19090) | 56429..57061 | - | 633 | WP_001749440 | type-F conjugative transfer system protein TraW | traW |
| D6D46_RS19000 (D6D46_19095) | 57058..57444 | - | 387 | WP_000099687 | type-F conjugative transfer system protein TrbI | - |
| D6D46_RS19005 (D6D46_19100) | 57441..60068 | - | 2628 | WP_001064265 | type IV secretion system protein TraC | virb4 |
| D6D46_RS19010 (D6D46_19105) | 60228..60449 | - | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| D6D46_RS19015 (D6D46_19110) | 60584..61099 | - | 516 | WP_000724019 | type IV conjugative transfer system lipoprotein TraV | traV |
| D6D46_RS19020 (D6D46_19115) | 61096..61416 | - | 321 | WP_001057285 | conjugal transfer protein TrbD | - |
| D6D46_RS19025 (D6D46_19120) | 61403..61990 | - | 588 | WP_053320746 | conjugal transfer pilus-stabilizing protein TraP | - |
| D6D46_RS19030 (D6D46_19125) | 61980..63407 | - | 1428 | WP_000146672 | F-type conjugal transfer pilus assembly protein TraB | traB |
| D6D46_RS19035 (D6D46_19130) | 63407..64135 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| D6D46_RS19040 (D6D46_19135) | 64122..64688 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| D6D46_RS19045 (D6D46_19140) | 64710..65021 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| D6D46_RS19050 (D6D46_19145) | 65026..65388 | - | 363 | WP_000994784 | type IV conjugative transfer system pilin TraA | - |
| D6D46_RS19055 (D6D46_19150) | 65421..65816 | - | 396 | WP_053320748 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| D6D46_RS19060 (D6D46_19155) | 65915..66604 | - | 690 | WP_000283380 | conjugal transfer transcriptional regulator TraJ | - |
| D6D46_RS19065 (D6D46_19160) | 66791..67174 | - | 384 | WP_053320747 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| D6D46_RS19070 (D6D46_19165) | 67495..68097 | + | 603 | WP_000243709 | transglycosylase SLT domain-containing protein | virB1 |
| D6D46_RS19075 (D6D46_19170) | 68394..69215 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| D6D46_RS19080 (D6D46_19175) | 69337..69624 | - | 288 | WP_000107535 | hypothetical protein | - |
| D6D46_RS19085 (D6D46_19180) | 69649..69855 | - | 207 | WP_000547939 | hypothetical protein | - |
| D6D46_RS28010 | 69925..70098 | + | 174 | Protein_78 | hypothetical protein | - |
| D6D46_RS28015 (D6D46_19190) | 70096..70326 | - | 231 | WP_001426396 | hypothetical protein | - |
| D6D46_RS19100 (D6D46_19195) | 70546..70671 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| D6D46_RS28020 | 70613..70762 | - | 150 | Protein_81 | plasmid maintenance protein Mok | - |
| D6D46_RS27535 | 70784..70972 | + | 189 | WP_001299721 | hypothetical protein | - |
| D6D46_RS19105 (D6D46_19200) | 70941..71703 | - | 763 | Protein_83 | plasmid SOS inhibition protein A | - |
| D6D46_RS19110 (D6D46_19205) | 71700..72134 | - | 435 | WP_000845934 | conjugation system SOS inhibitor PsiB | - |