T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 42840..53165
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PF328_RS23585 (PF328_23585) | 38696..40129 | - | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |
| PF328_RS23590 (PF328_23590) | 40228..40489 | + | 262 | Protein_43 | IS1 family transposase | - |
| PF328_RS23595 (PF328_23595) | 40500..40706 | - | 207 | WP_001749967 | hypothetical protein | - |
| PF328_RS23600 (PF328_23600) | 40711..41358 | - | 648 | WP_015344958 | restriction endonuclease | - |
| PF328_RS23605 (PF328_23605) | 41408..41719 | - | 312 | WP_001452736 | hypothetical protein | - |
| PF328_RS23610 (PF328_23610) | 41755..42069 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| PF328_RS23615 (PF328_23615) | 42066..42410 | - | 345 | WP_001749964 | hypothetical protein | - |
| PF328_RS23620 (PF328_23620) | 42426..42731 | - | 306 | WP_000960954 | H-NS family nucleoid-associated regulatory protein | - |
| PF328_RS23625 (PF328_23625) | 42840..43574 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| PF328_RS23630 (PF328_23630) | 43583..43864 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| PF328_RS23635 (PF328_23635) | 43874..44167 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| PF328_RS23640 (PF328_23640) | 44217..44534 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| PF328_RS23645 (PF328_23645) | 44666..47134 | + | 2469 | WP_225303560 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| PF328_RS23650 (PF328_23650) | 47152..47865 | + | 714 | WP_000749362 | type IV secretion system protein | virB5 |
| PF328_RS23655 (PF328_23655) | 47873..48100 | + | 228 | WP_000734973 | IncN-type entry exclusion lipoprotein EexN | - |
| PF328_RS23660 (PF328_23660) | 48116..49156 | + | 1041 | WP_000886022 | type IV secretion system protein | virB6 |
| PF328_RS23865 | 49257..49385 | + | 129 | WP_071882546 | conjugal transfer protein TraN | - |
| PF328_RS23665 (PF328_23665) | 49375..50073 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| PF328_RS23670 (PF328_23670) | 50084..50968 | + | 885 | WP_000735067 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| PF328_RS23675 (PF328_23675) | 50968..52128 | + | 1161 | WP_000101712 | type IV secretion system protein VirB10 | virB10 |
| PF328_RS23680 (PF328_23680) | 52170..53165 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| PF328_RS23685 (PF328_23685) | 53165..53698 | + | 534 | WP_000731968 | phospholipase D family protein | - |
| PF328_RS23690 (PF328_23690) | 53768..56734 | - | 2967 | WP_001138014 | Tn3-like element TnAs1 family transposase | - |
| PF328_RS23695 (PF328_23695) | 56738..57298 | - | 561 | WP_001161490 | recombinase family protein | - |