T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 8699..18808
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRV88_RS23595 (HRV88_23515) | 4129..4398 | + | 270 | WP_001006717 | hypothetical protein | - |
| HRV88_RS23600 (HRV88_23520) | 4388..4630 | + | 243 | WP_000008707 | hypothetical protein | - |
| HRV88_RS23605 (HRV88_23525) | 4724..5062 | + | 339 | WP_001099725 | hypothetical protein | - |
| HRV88_RS23610 (HRV88_23530) | 5137..5301 | + | 165 | WP_000004083 | hypothetical protein | - |
| HRV88_RS23615 (HRV88_23535) | 5298..5555 | + | 258 | WP_235127653 | hypothetical protein | - |
| HRV88_RS23620 (HRV88_23545) | 5896..6441 | + | 546 | WP_001348698 | DNA distortion polypeptide 1 | - |
| HRV88_RS23625 (HRV88_23550) | 6444..7604 | + | 1161 | WP_004199101 | MobP1 family relaxase | - |
| HRV88_RS23630 (HRV88_23555) | 7957..8466 | + | 510 | WP_000455437 | transcription termination/antitermination NusG family protein | - |
| HRV88_RS23635 (HRV88_23560) | 8699..9343 | + | 645 | WP_000953538 | lytic transglycosylase domain-containing protein | virB1 |
| HRV88_RS23640 (HRV88_23565) | 9327..9617 | + | 291 | WP_000916156 | TrbC/VirB2 family protein | virB2 |
| HRV88_RS23645 (HRV88_23570) | 9642..12395 | + | 2754 | WP_015060057 | VirB3 family type IV secretion system protein | virb4 |
| HRV88_RS23650 (HRV88_23575) | 12405..13175 | + | 771 | WP_000716326 | type IV secretion system protein | - |
| HRV88_RS23655 (HRV88_23580) | 13185..13442 | + | 258 | WP_000759841 | EexN family lipoprotein | - |
| HRV88_RS23660 (HRV88_23585) | 13454..14509 | + | 1056 | WP_000235886 | type IV secretion system protein | virB6 |
| HRV88_RS23665 (HRV88_23590) | 14704..15432 | + | 729 | WP_004199085 | type IV secretion system protein | virB8 |
| HRV88_RS23670 (HRV88_23595) | 15438..16367 | + | 930 | WP_000783386 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HRV88_RS23675 (HRV88_23600) | 16364..17578 | + | 1215 | WP_001295060 | VirB10/TraB/TrbI family type IV secretion system protein | virB10 |
| HRV88_RS23680 (HRV88_23605) | 17580..17777 | + | 198 | WP_000629109 | DNA-binding protein | - |
| HRV88_RS23685 (HRV88_23610) | 17774..18808 | + | 1035 | WP_000650512 | P-type DNA transfer ATPase VirB11 | virB11 |
| HRV88_RS23690 (HRV88_23615) | 18811..20646 | + | 1836 | WP_000053822 | type IV secretory system conjugative DNA transfer family protein | - |
| HRV88_RS23695 (HRV88_23620) | 20643..21035 | + | 393 | WP_000738524 | cag pathogenicity island Cag12 family protein | - |
| HRV88_RS23700 (HRV88_23625) | 21123..21437 | + | 315 | WP_000754496 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HRV88_RS23705 (HRV88_23630) | 21523..21849 | + | 327 | WP_004208538 | hypothetical protein | - |
| HRV88_RS23710 (HRV88_23635) | 21846..22340 | + | 495 | WP_001215543 | thermonuclease family protein | - |
| HRV88_RS23715 (HRV88_23640) | 22423..23685 | + | 1263 | WP_000517490 | ATP-binding protein | - |