T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 56112..81303
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00405 (DIHLIJNC_00086) | 52137..52370 | - | 234 | WP_001191892 | hypothetical protein | - |
| SLH58_RS00410 (DIHLIJNC_00087) | 52352..52969 | - | 618 | WP_001249396 | hypothetical protein | - |
| SLH58_RS00415 (DIHLIJNC_00088) | 53137..56115 | + | 2979 | WP_001337757 | MobH family relaxase | - |
| SLH58_RS00420 (DIHLIJNC_00089) | 56112..57977 | + | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| SLH58_RS00425 (DIHLIJNC_00090) | 57988..58572 | + | 585 | WP_000332866 | hypothetical protein | - |
| SLH58_RS00430 (DIHLIJNC_00091) | 58529..59158 | + | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| SLH58_RS00435 (DIHLIJNC_00092) | 59168..59614 | + | 447 | WP_000122506 | hypothetical protein | - |
| SLH58_RS00440 (DIHLIJNC_00093) | 59624..60001 | + | 378 | WP_000869261 | hypothetical protein | - |
| SLH58_RS00445 (DIHLIJNC_00094) | 60001..60663 | + | 663 | WP_001231463 | hypothetical protein | - |
| SLH58_RS00450 (DIHLIJNC_00095) | 60844..60987 | + | 144 | WP_001275801 | hypothetical protein | - |
| SLH58_RS00455 (DIHLIJNC_00096) | 60999..61364 | + | 366 | WP_001052531 | hypothetical protein | - |
| SLH58_RS00460 (DIHLIJNC_00097) | 61509..61790 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| SLH58_RS00465 (DIHLIJNC_00098) | 61787..62413 | + | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| SLH58_RS00470 (DIHLIJNC_00099) | 62397..63314 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| SLH58_RS00475 (DIHLIJNC_00100) | 63314..64627 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| SLH58_RS00480 (DIHLIJNC_00101) | 64624..65202 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| SLH58_RS00485 (DIHLIJNC_00102) | 65206..65598 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| SLH58_RS00490 (DIHLIJNC_00103) | 65799..71330 | + | 5532 | WP_000606833 | Ig-like domain-containing protein | - |
| SLH58_RS00495 (DIHLIJNC_00104) | 71479..72186 | + | 708 | WP_001259347 | DsbC family protein | - |
| SLH58_RS00500 (DIHLIJNC_00105) | 72183..74630 | + | 2448 | WP_000637386 | type IV secretion system protein TraC | virb4 |
| SLH58_RS00505 (DIHLIJNC_00106) | 74645..74962 | + | 318 | WP_000351984 | hypothetical protein | - |
| SLH58_RS00510 (DIHLIJNC_00107) | 74959..75489 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| SLH58_RS00515 (DIHLIJNC_00108) | 75452..76717 | + | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| SLH58_RS00520 (DIHLIJNC_00109) | 76714..77385 | + | 672 | WP_001337754 | EAL domain-containing protein | - |
| SLH58_RS00525 (DIHLIJNC_00110) | 77385..78389 | + | 1005 | WP_043940352 | TraU family protein | traU |
| SLH58_RS00530 (DIHLIJNC_00111) | 78493..81303 | + | 2811 | WP_001909286 | conjugal transfer mating pair stabilization protein TraN | traN |
| SLH58_RS00535 (DIHLIJNC_00112) | 81342..82202 | - | 861 | WP_000709517 | hypothetical protein | - |
| SLH58_RS00540 (DIHLIJNC_00113) | 82325..82966 | - | 642 | WP_000796664 | hypothetical protein | - |
| SLH58_RS00545 (DIHLIJNC_00114) | 83260..83580 | + | 321 | WP_000547566 | hypothetical protein | - |
| SLH58_RS00550 (DIHLIJNC_00116) | 83884..84069 | + | 186 | WP_001186917 | hypothetical protein | - |
| SLH58_RS00555 (DIHLIJNC_00117) | 84289..85257 | + | 969 | WP_000085162 | AAA family ATPase | - |
| SLH58_RS00560 (DIHLIJNC_00118) | 85268..86176 | + | 909 | WP_000739139 | hypothetical protein | - |