T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 36006..58061
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HG686_RS00515 | 31627..32892 | - | 1266 | WP_168397225 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HG686_RS00520 | 32880..33314 | - | 435 | WP_011154440 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HG686_RS00525 | 33707..34039 | - | 333 | WP_338325700 | type II toxin-antitoxin system toxin endoribonuclease PemK-mt | - |
| HG686_RS00530 | 34041..34298 | - | 258 | WP_000557618 | type II toxin-antitoxin system antitoxin PemI | - |
| HG686_RS00535 | 34390..35043 | - | 654 | WP_168397224 | type II CAAX endopeptidase family protein | - |
| HG686_RS00540 | 35156..35506 | + | 351 | WP_240156340 | DUF1496 domain-containing protein | - |
| HG686_RS00545 | 35611..36006 | + | 396 | WP_011154483 | lytic transglycosylase domain-containing protein | - |
| HG686_RS00550 | 36006..37313 | + | 1308 | WP_011154482 | hypothetical protein | trbA |
| HG686_RS00555 | 37324..38274 | + | 951 | WP_168397222 | DsbC family protein | trbB |
| HG686_RS00560 | 38287..40374 | + | 2088 | WP_011154480 | conjugative transfer protein | - |
| HG686_RS18720 | 40425..40520 | - | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| HG686_RS00565 | 40909..41046 | - | 138 | Protein_62 | type II toxin-antitoxin system CcdA family antitoxin | - |
| HG686_RS00570 | 42051..43106 | - | 1056 | WP_011154479 | plasmid replication initiator RepA | - |
| HG686_RS00575 | 43404..43634 | - | 231 | WP_011091085 | IncL/M type plasmid replication protein RepC | - |
| HG686_RS00580 | 43708..44361 | - | 654 | WP_168397219 | ExcA | - |
| HG686_RS00585 | 44364..46544 | - | 2181 | WP_004187492 | DotA/TraY family protein | traY |
| HG686_RS00590 | 46537..47187 | - | 651 | WP_011154475 | hypothetical protein | - |
| HG686_RS00595 | 47184..48392 | - | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| HG686_RS00600 | 48389..51439 | - | 3051 | WP_011154474 | conjugative transfer protein | traU |
| HG686_RS00605 | 51436..51930 | - | 495 | WP_011154473 | hypothetical protein | - |
| HG686_RS00610 | 51976..52365 | - | 390 | WP_011154472 | DUF6750 family protein | traR |
| HG686_RS00615 | 52382..52912 | - | 531 | WP_011091077 | conjugal transfer protein TraQ | traQ |
| HG686_RS00620 | 52936..53640 | - | 705 | WP_011154471 | conjugal transfer protein TraP | traP |
| HG686_RS00625 | 53652..55001 | - | 1350 | WP_011154470 | conjugal transfer protein TraO | traO |
| HG686_RS00630 | 55013..56164 | - | 1152 | WP_011154469 | DotH/IcmK family type IV secretion protein | traN |
| HG686_RS00635 | 56173..56886 | - | 714 | WP_223294958 | DotI/IcmL family type IV secretion protein | traM |
| HG686_RS00640 | 56954..57364 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| HG686_RS00645 | 57393..57548 | + | 156 | WP_172693602 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| HG686_RS00650 | 57549..58061 | - | 513 | WP_011091071 | hypothetical protein | traL |
| HG686_RS00655 | 58027..59691 | - | 1665 | WP_168397231 | LPD7 domain-containing protein | - |