T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 769..11446
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_0 | 97..459 | + | 363 | CAD97487 | TrbA protein | - |
| Locus_1 | 769..1731 | + | 963 | CAD97488 | putative ATPase, autophosphorylase | virB11 |
| Locus_2 | 1748..2212 | + | 465 | CAD97489 | putative prepilin | virB2 |
| Locus_3 | 2216..2527 | + | 312 | CAD97490 | TrbD protein | virB3 |
| Locus_4 | 2524..5082 | + | 2559 | CAD97491 | TrbE protein | virb4 |
| Locus_5 | 5079..5861 | + | 783 | CAD97492 | TrbF protein | virB8 |
| Locus_6 | 5858..6778 | + | 921 | CAD97493 | TrbG protein | virB9 |
| Locus_7 | 6781..7269 | + | 489 | CAD97494 | TrbH protein | - |
| Locus_8 | 7274..8695 | + | 1422 | CAD97495 | TrbI protein | virB10 |
| Locus_9 | 8716..9480 | + | 765 | CAD97496 | TrbJ protein | virB5 |
| Locus_10 | 9490..9717 | + | 228 | CAD97497 | TrbK protein | - |
| Locus_11 | 9728..11446 | + | 1719 | CAD97498 | putative DNA topoisomerase | virB6 |
| Locus_12 | 11464..12051 | + | 588 | CAD97499 | TrbM protein | - |
| Locus_13 | 12065..12700 | + | 636 | CAD97500 | putative muramidase | - |
| Locus_14 | 12729..12995 | + | 267 | CAD97501 | TrbO protein | - |
| Locus_15 | 12995..13693 | + | 699 | CAD97502 | TrbP protein | - |
| Locus_16 | 13709..14140 | + | 432 | CAD97503 | putative outer membrane protein | - |
| Locus_17 | 14404..14904 | - | 501 | CAD97504 | putative acetyltransferase | - |
| Locus_18 | 15032..15871 | - | 840 | CAD97505 | dihydropteroate synthetase | - |
| Locus_19 | 15865..16212 | - | 348 | CAD97506 | small exporter protein | - |