T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48240..57330
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VOI39_RS21855 | 44271..44504 | - | 234 | WP_001191890 | hypothetical protein | - |
| VOI39_RS21860 (PSTU1396_22235) | 44486..45103 | - | 618 | WP_001249395 | hypothetical protein | - |
| VOI39_RS21865 (PSTU1396_22240) | 45271..48243 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| VOI39_RS21870 (PSTU1396_22245) | 48240..50105 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| VOI39_RS21875 (PSTU1396_22250) | 50155..50700 | + | 546 | WP_000228720 | hypothetical protein | - |
| VOI39_RS21880 (PSTU1396_22255) | 50657..51286 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| VOI39_RS21885 | 51334..51510 | + | 177 | WP_169342285 | hypothetical protein | - |
| VOI39_RS21890 (PSTU1396_22265) | 51752..52129 | + | 378 | WP_000869297 | hypothetical protein | - |
| VOI39_RS21895 (PSTU1396_22270) | 52129..52791 | + | 663 | WP_001231464 | hypothetical protein | - |
| VOI39_RS21900 (PSTU1396_22275) | 52972..53115 | + | 144 | WP_001275801 | hypothetical protein | - |
| VOI39_RS21905 (PSTU1396_22280) | 53127..53492 | + | 366 | WP_001052530 | hypothetical protein | - |
| VOI39_RS21910 | 53637..53918 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| VOI39_RS21915 (PSTU1396_22285) | 53915..54541 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| VOI39_RS21920 (PSTU1396_22290) | 54525..55442 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| VOI39_RS21925 (PSTU1396_22295) | 55442..56755 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| VOI39_RS21930 (PSTU1396_22300) | 56752..57330 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| VOI39_RS21935 (PSTU1396_22305) | 57334..57726 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| VOI39_RS21940 (PSTU1396_22310) | 58011..59273 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| VOI39_RS21945 (PSTU1396_22315) | 59597..60742 | + | 1146 | WP_015056382 | class C beta-lactamase CMY-4 | - |
| VOI39_RS21950 (PSTU1396_22320) | 60836..61369 | + | 534 | WP_001221666 | lipocalin family protein | - |
| VOI39_RS21955 (PSTU1396_22325) | 61366..61683 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| VOI39_RS21960 (PSTU1396_22330) | 61940..62305 | + | 366 | Protein_91 | LuxR family transcriptional regulator | - |