T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1995..23928
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIL16_RS27810 (NIL16_27785) | 70..297 | + | 228 | WP_032440573 | hypothetical protein | - |
| NIL16_RS27815 (NIL16_27790) | 1029..1508 | + | 480 | WP_032440574 | lytic transglycosylase domain-containing protein | - |
| NIL16_RS27820 (NIL16_27795) | 1534..1998 | + | 465 | WP_225546581 | DotD/TraH family lipoprotein | - |
| NIL16_RS27825 (NIL16_27800) | 1995..2813 | + | 819 | WP_032440576 | type IV secretory system conjugative DNA transfer family protein | traI |
| NIL16_RS27830 (NIL16_27805) | 2791..3978 | + | 1188 | WP_077255878 | plasmid transfer ATPase TraJ | virB11 |
| NIL16_RS27835 (NIL16_27810) | 3975..4241 | + | 267 | WP_032440577 | IcmT/TraK family protein | traK |
| NIL16_RS27840 (NIL16_27815) | 4259..7672 | + | 3414 | WP_052145516 | LPD7 domain-containing protein | - |
| NIL16_RS27845 (NIL16_27820) | 7706..8059 | + | 354 | WP_032440584 | hypothetical protein | traL |
| NIL16_RS27850 (NIL16_27825) | 8131..8799 | + | 669 | WP_032440585 | DotI/IcmL/TraM family protein | traM |
| NIL16_RS27855 (NIL16_27830) | 8810..9913 | + | 1104 | WP_077264204 | DotH/IcmK family type IV secretion protein | traN |
| NIL16_RS27860 (NIL16_27835) | 9917..11257 | + | 1341 | WP_032440586 | conjugal transfer protein TraO | traO |
| NIL16_RS27865 (NIL16_27840) | 11264..11983 | + | 720 | WP_050597333 | conjugal transfer protein TraP | traP |
| NIL16_RS27870 (NIL16_27845) | 11993..12526 | + | 534 | WP_032440587 | conjugal transfer protein TraQ | traQ |
| NIL16_RS27875 (NIL16_27850) | 12582..12983 | + | 402 | WP_032440588 | DUF6750 family protein | traR |
| NIL16_RS27880 (NIL16_27855) | 13027..13590 | + | 564 | WP_045325070 | hypothetical protein | traT |
| NIL16_RS27885 (NIL16_27860) | 13600..16647 | + | 3048 | WP_032440589 | conjugal transfer protein | traU |
| NIL16_RS27890 (NIL16_27865) | 16657..17853 | + | 1197 | WP_032440590 | conjugal transfer protein TraW | traW |
| NIL16_RS27895 (NIL16_27870) | 17850..18431 | + | 582 | WP_050597335 | conjugal transfer protein TraX | - |
| NIL16_RS27900 (NIL16_27875) | 18473..20617 | + | 2145 | WP_032440591 | DotA/TraY family protein | traY |
| NIL16_RS27905 (NIL16_27880) | 20683..21306 | + | 624 | WP_032440592 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NIL16_RS27910 (NIL16_27885) | 21408..22826 | + | 1419 | WP_063666705 | hypothetical protein | trbA |
| NIL16_RS27915 (NIL16_27890) | 22837..23928 | + | 1092 | WP_050597336 | thioredoxin fold domain-containing protein | trbB |
| NIL16_RS27920 (NIL16_27895) | 23930..26122 | + | 2193 | WP_032440593 | F-type conjugative transfer protein TrbC | - |
| NIL16_RS27925 (NIL16_27900) | 26168..26701 | + | 534 | WP_032440594 | phospholipase D family protein | - |
| NIL16_RS27930 (NIL16_27905) | 26713..26964 | + | 252 | WP_113394424 | hypothetical protein | - |
| NIL16_RS27935 (NIL16_27910) | 27470..28165 | + | 696 | WP_254910806 | RepA family replication protein | - |