T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 49833..58923
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IFA27_RS00350 | 45864..46097 | - | 234 | WP_001191892 | hypothetical protein | - |
| IFA27_RS00355 (pC12_00055) | 46079..46696 | - | 618 | WP_001249396 | hypothetical protein | - |
| IFA27_RS00360 | 46864..49836 | + | 2973 | WP_064986968 | MobH family relaxase | - |
| IFA27_RS00365 | 49833..51698 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| IFA27_RS00370 (pC12_00058) | 51709..52293 | + | 585 | WP_000332868 | hypothetical protein | - |
| IFA27_RS00375 (pC12_00059) | 52250..52879 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| IFA27_RS00380 | 52889..53335 | + | 447 | WP_000122507 | hypothetical protein | - |
| IFA27_RS00385 (pC12_00060) | 53345..53722 | + | 378 | WP_000869297 | hypothetical protein | - |
| IFA27_RS00390 (pC12_00061) | 53722..54384 | + | 663 | WP_189665944 | hypothetical protein | - |
| IFA27_RS00395 | 54565..54708 | + | 144 | WP_001275801 | hypothetical protein | - |
| IFA27_RS00400 (pC12_00062) | 54720..55085 | + | 366 | WP_001052530 | hypothetical protein | - |
| IFA27_RS00405 | 55230..55511 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| IFA27_RS00410 | 55508..56134 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| IFA27_RS00415 | 56118..57035 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| IFA27_RS00420 | 57035..58348 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| IFA27_RS00425 | 58345..58923 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| IFA27_RS00430 | 58927..59319 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| IFA27_RS00435 | 59604..59777 | + | 174 | Protein_87 | IS1380 family transposase | - |
| IFA27_RS00440 (pC12_00069) | 59886..61094 | + | 1209 | WP_001339197 | IS4-like element ISVsa5 family transposase | - |
| IFA27_RS00445 | 61104..62204 | + | 1101 | Protein_89 | IS1380-like element ISEcp1 family transposase | - |
| IFA27_RS00450 | 62528..63673 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |