T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 47013..75485
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RD361_RS29655 (RD361_29655) | 47013..49325 | - | 2313 | WP_069985711 | type IV conjugative transfer system coupling protein TraD | virb4 |
| RD361_RS29660 (RD361_29660) | 49454..50143 | - | 690 | WP_072101983 | hypothetical protein | - |
| RD361_RS29665 (RD361_29665) | 50336..51067 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| RD361_RS29670 (RD361_29670) | 51253..51786 | - | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| RD361_RS29675 (RD361_29675) | 51789..54638 | - | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| RD361_RS29680 (RD361_29680) | 54638..56017 | - | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| RD361_RS29685 (RD361_29685) | 55995..56438 | - | 444 | WP_004194305 | F-type conjugal transfer protein TrbF | - |
| RD361_RS29690 (RD361_29690) | 56484..57041 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| RD361_RS29695 (RD361_29695) | 57013..57252 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| RD361_RS29700 (RD361_29700) | 57263..58015 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| RD361_RS29705 (RD361_29705) | 58036..58362 | - | 327 | WP_004152676 | hypothetical protein | - |
| RD361_RS29710 (RD361_29710) | 58375..58623 | - | 249 | WP_004152675 | hypothetical protein | - |
| RD361_RS29715 (RD361_29715) | 58601..58855 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| RD361_RS29720 (RD361_29720) | 58887..60842 | - | 1956 | WP_030003482 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| RD361_RS29725 (RD361_29725) | 60901..61539 | - | 639 | WP_069985712 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| RD361_RS29730 (RD361_29730) | 61552..62541 | - | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| RD361_RS29735 (RD361_29735) | 62538..62939 | - | 402 | WP_004194979 | hypothetical protein | - |
| RD361_RS29740 (RD361_29740) | 62974..63609 | - | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| RD361_RS29745 (RD361_29745) | 63609..63998 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| RD361_RS29750 (RD361_29750) | 63998..66637 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| RD361_RS29755 (RD361_29755) | 66709..67107 | - | 399 | WP_023179972 | hypothetical protein | - |
| RD361_RS29760 (RD361_29760) | 67485..67889 | - | 405 | WP_004197817 | hypothetical protein | - |
| RD361_RS29765 (RD361_29765) | 67956..68267 | - | 312 | WP_029497417 | hypothetical protein | - |
| RD361_RS29770 (RD361_29770) | 68268..68486 | - | 219 | WP_004195468 | hypothetical protein | - |
| RD361_RS29775 (RD361_29775) | 68809..69393 | - | 585 | WP_032440547 | type IV conjugative transfer system lipoprotein TraV | traV |
| RD361_RS29780 (RD361_29780) | 69466..70890 | - | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| RD361_RS29785 (RD361_29785) | 70890..71630 | - | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| RD361_RS29790 (RD361_29790) | 71617..72183 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| RD361_RS29795 (RD361_29795) | 72203..72508 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| RD361_RS29800 (RD361_29800) | 72522..72890 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| RD361_RS29805 (RD361_29805) | 72959..73159 | - | 201 | WP_004194116 | TraY domain-containing protein | - |
| RD361_RS29810 (RD361_29810) | 73245..73946 | - | 702 | WP_004194113 | hypothetical protein | - |
| RD361_RS29815 (RD361_29815) | 74176..74568 | - | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| RD361_RS29820 (RD361_29820) | 75000..75485 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| RD361_RS29825 (RD361_29825) | 75518..75847 | - | 330 | WP_047066474 | DUF5983 family protein | - |
| RD361_RS29830 (RD361_29830) | 75880..76701 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| RD361_RS29835 (RD361_29835) | 77531..77944 | - | 414 | WP_023287139 | helix-turn-helix domain-containing protein | - |
| RD361_RS29840 (RD361_29840) | 77945..78223 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| RD361_RS29845 (RD361_29845) | 78213..78533 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| RD361_RS29850 (RD361_29850) | 78614..78838 | - | 225 | WP_014343499 | hypothetical protein | - |
| RD361_RS29855 (RD361_29855) | 78849..79061 | - | 213 | WP_019706020 | hypothetical protein | - |
| RD361_RS29860 (RD361_29860) | 79154..80134 | + | 981 | WP_000019445 | IS5-like element ISKpn26 family transposase | - |