T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 80869..106060
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RD361_RS28265 (RD361_28265) | 76894..77127 | - | 234 | WP_001191892 | hypothetical protein | - |
| RD361_RS28270 (RD361_28270) | 77109..77726 | - | 618 | WP_001249396 | hypothetical protein | - |
| RD361_RS28275 (RD361_28275) | 77894..80872 | + | 2979 | WP_001337757 | MobH family relaxase | - |
| RD361_RS28280 (RD361_28280) | 80869..82734 | + | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| RD361_RS28285 (RD361_28285) | 82784..83329 | + | 546 | WP_000228720 | hypothetical protein | - |
| RD361_RS28290 (RD361_28290) | 83286..83915 | + | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| RD361_RS28295 (RD361_28295) | 83925..84371 | + | 447 | WP_000122506 | hypothetical protein | - |
| RD361_RS28300 (RD361_28300) | 84381..84758 | + | 378 | WP_000869261 | hypothetical protein | - |
| RD361_RS28305 (RD361_28305) | 84758..85420 | + | 663 | WP_001231463 | hypothetical protein | - |
| RD361_RS28310 (RD361_28310) | 85601..85744 | + | 144 | WP_001275801 | hypothetical protein | - |
| RD361_RS28315 (RD361_28315) | 85756..86121 | + | 366 | WP_001052531 | hypothetical protein | - |
| RD361_RS28320 (RD361_28320) | 86266..86547 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| RD361_RS28325 (RD361_28325) | 86544..87170 | + | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| RD361_RS28330 (RD361_28330) | 87154..88071 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| RD361_RS28335 (RD361_28335) | 88071..89384 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| RD361_RS28340 (RD361_28340) | 89381..89959 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| RD361_RS28345 (RD361_28345) | 89963..90355 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| RD361_RS28350 (RD361_28350) | 90556..96087 | + | 5532 | WP_085281193 | Ig-like domain-containing protein | - |
| RD361_RS28355 (RD361_28355) | 96236..96943 | + | 708 | WP_001259347 | DsbC family protein | - |
| RD361_RS28360 (RD361_28360) | 96940..99387 | + | 2448 | WP_000637386 | type IV secretion system protein TraC | virb4 |
| RD361_RS28365 (RD361_28365) | 99402..99719 | + | 318 | WP_000351984 | hypothetical protein | - |
| RD361_RS28370 (RD361_28370) | 99716..100246 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| RD361_RS28375 (RD361_28375) | 100209..101474 | + | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| RD361_RS28380 (RD361_28380) | 101471..102142 | + | 672 | WP_001337754 | EAL domain-containing protein | - |
| RD361_RS28385 (RD361_28385) | 102142..103146 | + | 1005 | WP_043940352 | TraU family protein | traU |
| RD361_RS28390 (RD361_28390) | 103262..106060 | + | 2799 | WP_001256487 | conjugal transfer mating pair stabilization protein TraN | traN |
| RD361_RS28395 (RD361_28395) | 106099..106959 | - | 861 | WP_000709517 | hypothetical protein | - |
| RD361_RS28400 (RD361_28400) | 107082..107723 | - | 642 | WP_000796664 | hypothetical protein | - |
| RD361_RS28405 (RD361_28405) | 108017..108337 | + | 321 | WP_000547566 | hypothetical protein | - |
| RD361_RS28410 (RD361_28410) | 108641..108826 | + | 186 | WP_001186917 | hypothetical protein | - |
| RD361_RS28415 (RD361_28415) | 109046..110014 | + | 969 | WP_000085162 | AAA family ATPase | - |
| RD361_RS28420 (RD361_28420) | 110025..110933 | + | 909 | WP_000739139 | hypothetical protein | - |