T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1139..27582
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM486_RS27680 (AM486_27625) | 1139..3004 | + | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| AM486_RS27685 (AM486_27630) | 3054..3599 | + | 546 | WP_000228720 | hypothetical protein | - |
| AM486_RS27690 (AM486_27635) | 3556..4185 | + | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| AM486_RS27695 (AM486_27640) | 4195..4641 | + | 447 | WP_000122506 | hypothetical protein | - |
| AM486_RS27700 (AM486_27645) | 4651..5028 | + | 378 | WP_000869261 | hypothetical protein | - |
| AM486_RS27705 (AM486_27650) | 5028..5690 | + | 663 | WP_001231463 | hypothetical protein | - |
| AM486_RS29860 | 5871..6014 | + | 144 | WP_001275801 | hypothetical protein | - |
| AM486_RS27710 (AM486_27655) | 6026..6391 | + | 366 | WP_001052531 | hypothetical protein | - |
| AM486_RS27715 (AM486_27660) | 6536..6817 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| AM486_RS27720 (AM486_27665) | 6814..7440 | + | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| AM486_RS27725 (AM486_27670) | 7424..8341 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| AM486_RS27730 (AM486_27675) | 8341..9654 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| AM486_RS27735 (AM486_27680) | 9651..10229 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| AM486_RS27740 (AM486_27685) | 10233..10625 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| AM486_RS27745 (AM486_27690) | 10826..16357 | + | 5532 | WP_088296439 | Ig-like domain-containing protein | - |
| AM486_RS27750 (AM486_27695) | 16506..17213 | + | 708 | WP_001259347 | DsbC family protein | - |
| AM486_RS27755 (AM486_27700) | 17210..19657 | + | 2448 | WP_088296440 | type IV secretion system protein TraC | virb4 |
| AM486_RS27760 (AM486_27705) | 19672..19989 | + | 318 | WP_000351984 | hypothetical protein | - |
| AM486_RS27765 (AM486_27710) | 19986..20516 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| AM486_RS27770 (AM486_27715) | 20479..21744 | + | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| AM486_RS27775 (AM486_27720) | 21741..21983 | + | 243 | Protein_21 | EAL domain-containing protein | - |
| AM486_RS27780 (AM486_27725) | 22057..23225 | + | 1169 | WP_085929673 | IS3-like element ISEc52 family transposase | - |
| AM486_RS27785 (AM486_27730) | 23155..23664 | + | 510 | WP_319823304 | EAL domain-containing protein | - |
| AM486_RS27790 (AM486_27735) | 23664..24668 | + | 1005 | WP_043940352 | TraU family protein | traU |
| AM486_RS27795 (AM486_27740) | 24784..27582 | + | 2799 | WP_001256487 | conjugal transfer mating pair stabilization protein TraN | traN |
| AM486_RS27800 (AM486_27745) | 27621..28481 | - | 861 | WP_000709517 | hypothetical protein | - |
| AM486_RS27805 (AM486_27750) | 28604..29245 | - | 642 | WP_000796664 | hypothetical protein | - |
| AM486_RS27810 (AM486_27755) | 29539..29859 | + | 321 | WP_000547566 | hypothetical protein | - |
| AM486_RS27815 (AM486_27760) | 30163..30348 | + | 186 | WP_001186917 | hypothetical protein | - |
| AM486_RS27820 (AM486_27765) | 30568..31536 | + | 969 | WP_000085162 | AAA family ATPase | - |
| AM486_RS27825 (AM486_27770) | 31547..32455 | + | 909 | WP_000739139 | hypothetical protein | - |