T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 45613..54703
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JY391_RS22805 (JY391_22805) | 41644..41877 | - | 234 | WP_001191890 | hypothetical protein | - |
| JY391_RS22810 (JY391_22810) | 41859..42476 | - | 618 | WP_001249395 | hypothetical protein | - |
| JY391_RS22815 (JY391_22815) | 42644..45616 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| JY391_RS22820 (JY391_22820) | 45613..47478 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| JY391_RS22825 (JY391_22825) | 47528..48073 | + | 546 | WP_000228720 | hypothetical protein | - |
| JY391_RS22830 (JY391_22830) | 48030..48659 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| JY391_RS22835 (JY391_22835) | 48669..49115 | + | 447 | WP_000122507 | hypothetical protein | - |
| JY391_RS22840 (JY391_22840) | 49125..49502 | + | 378 | WP_000869297 | hypothetical protein | - |
| JY391_RS22845 (JY391_22845) | 49502..50164 | + | 663 | WP_001231464 | hypothetical protein | - |
| JY391_RS22850 (JY391_22850) | 50500..50865 | + | 366 | WP_001052530 | hypothetical protein | - |
| JY391_RS22855 (JY391_22855) | 51010..51291 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| JY391_RS22860 (JY391_22860) | 51288..51914 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| JY391_RS22865 (JY391_22865) | 51898..52815 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| JY391_RS22870 (JY391_22870) | 52815..54128 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| JY391_RS22875 (JY391_22875) | 54125..54703 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| JY391_RS22880 (JY391_22880) | 54707..55099 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| JY391_RS22885 (JY391_22885) | 55384..56646 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| JY391_RS22890 (JY391_22890) | 56970..58115 | + | 1146 | WP_015056382 | class C beta-lactamase CMY-4 | - |
| JY391_RS22895 (JY391_22895) | 58209..58742 | + | 534 | WP_001221666 | lipocalin family protein | - |
| JY391_RS22900 (JY391_22900) | 58739..59056 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| JY391_RS23940 | 59313..59678 | + | 366 | Protein_86 | LuxR family transcriptional regulator | - |