T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48240..57330
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP441_RS23695 (NP441_23695) | 44271..44504 | - | 234 | WP_001191890 | hypothetical protein | - |
| NP441_RS23700 (NP441_23700) | 44486..45103 | - | 618 | WP_001249395 | hypothetical protein | - |
| NP441_RS23705 (NP441_23705) | 45271..48243 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| NP441_RS23710 (NP441_23710) | 48240..50105 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| NP441_RS23715 (NP441_23715) | 50155..50700 | + | 546 | WP_000228720 | hypothetical protein | - |
| NP441_RS23720 (NP441_23720) | 50657..51286 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| NP441_RS23725 (NP441_23725) | 51296..51742 | + | 447 | WP_000122507 | hypothetical protein | - |
| NP441_RS23730 (NP441_23730) | 51752..52129 | + | 378 | WP_000869297 | hypothetical protein | - |
| NP441_RS23735 (NP441_23735) | 52129..52791 | + | 663 | WP_001231464 | hypothetical protein | - |
| NP441_RS23740 (NP441_23740) | 53127..53492 | + | 366 | WP_001052530 | hypothetical protein | - |
| NP441_RS23745 (NP441_23745) | 53637..53918 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| NP441_RS23750 (NP441_23750) | 53915..54541 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| NP441_RS23755 (NP441_23755) | 54525..55442 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| NP441_RS23760 (NP441_23760) | 55442..56755 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| NP441_RS23765 (NP441_23765) | 56752..57330 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| NP441_RS23770 (NP441_23770) | 57334..57726 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| NP441_RS23775 (NP441_23775) | 58011..59274 | + | 1264 | Protein_82 | IS1380-like element ISEcp1 family transposase | - |
| NP441_RS23780 (NP441_23780) | 59598..60743 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| NP441_RS23785 (NP441_23785) | 60837..61370 | + | 534 | WP_001221666 | lipocalin family protein | - |
| NP441_RS23790 (NP441_23790) | 61367..61684 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| NP441_RS24345 | 61941..62306 | + | 366 | Protein_86 | LuxR family transcriptional regulator | - |