T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48240..57330
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP448_RS23910 (NP448_23915) | 44271..44504 | - | 234 | WP_001191890 | hypothetical protein | - |
| NP448_RS23915 (NP448_23920) | 44486..45103 | - | 618 | WP_001249395 | hypothetical protein | - |
| NP448_RS23920 (NP448_23925) | 45271..48243 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| NP448_RS23925 (NP448_23930) | 48240..50105 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| NP448_RS23930 (NP448_23935) | 50155..50700 | + | 546 | WP_000228720 | hypothetical protein | - |
| NP448_RS23935 (NP448_23940) | 50657..51286 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| NP448_RS23940 (NP448_23945) | 51296..51742 | + | 447 | WP_000122507 | hypothetical protein | - |
| NP448_RS23945 (NP448_23950) | 51752..52129 | + | 378 | WP_000869297 | hypothetical protein | - |
| NP448_RS23950 (NP448_23955) | 52129..52791 | + | 663 | WP_001231464 | hypothetical protein | - |
| NP448_RS23955 (NP448_23960) | 53127..53492 | + | 366 | WP_001052530 | hypothetical protein | - |
| NP448_RS23960 (NP448_23965) | 53637..53918 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| NP448_RS23965 (NP448_23970) | 53915..54541 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| NP448_RS23970 (NP448_23975) | 54525..55442 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| NP448_RS23975 (NP448_23980) | 55442..56755 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| NP448_RS23980 (NP448_23985) | 56752..57330 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| NP448_RS23985 (NP448_23990) | 57334..57726 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| NP448_RS23990 (NP448_23995) | 58011..59274 | + | 1264 | Protein_82 | IS1380-like element ISEcp1 family transposase | - |
| NP448_RS23995 (NP448_24000) | 59598..60743 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| NP448_RS24000 (NP448_24005) | 60837..61370 | + | 534 | WP_001221666 | lipocalin family protein | - |
| NP448_RS24005 (NP448_24010) | 61367..61684 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| NP448_RS24560 | 61941..62306 | + | 366 | Protein_86 | LuxR family transcriptional regulator | - |