T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 5797..27730
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRF21_RS28975 (NRF21_28975) | 1560..2255 | - | 696 | WP_254910806 | RepA family replication protein | - |
| NRF21_RS28980 (NRF21_28980) | 2761..3012 | - | 252 | WP_113394424 | hypothetical protein | - |
| NRF21_RS28985 (NRF21_28985) | 3024..3557 | - | 534 | WP_032440594 | phospholipase D family protein | - |
| NRF21_RS28990 (NRF21_28990) | 3603..5795 | - | 2193 | WP_032440593 | F-type conjugative transfer protein TrbC | - |
| NRF21_RS28995 (NRF21_28995) | 5797..6888 | - | 1092 | WP_050597336 | thioredoxin fold domain-containing protein | trbB |
| NRF21_RS29000 (NRF21_29000) | 6899..8317 | - | 1419 | WP_063666705 | hypothetical protein | trbA |
| NRF21_RS29005 (NRF21_29005) | 8419..9042 | - | 624 | WP_032440592 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NRF21_RS29010 (NRF21_29010) | 9108..11252 | - | 2145 | WP_143458320 | DotA/TraY family protein | traY |
| NRF21_RS29015 (NRF21_29015) | 11294..11875 | - | 582 | WP_050597335 | conjugal transfer protein TraX | - |
| NRF21_RS29020 (NRF21_29020) | 11872..13068 | - | 1197 | WP_032440590 | conjugal transfer protein TraW | traW |
| NRF21_RS29025 (NRF21_29025) | 13078..16125 | - | 3048 | WP_032440589 | conjugal transfer protein | traU |
| NRF21_RS29030 (NRF21_29030) | 16135..16698 | - | 564 | WP_045325070 | hypothetical protein | traT |
| NRF21_RS29035 (NRF21_29035) | 16742..17143 | - | 402 | WP_032440588 | DUF6750 family protein | traR |
| NRF21_RS29040 (NRF21_29040) | 17199..17732 | - | 534 | WP_032440587 | conjugal transfer protein TraQ | traQ |
| NRF21_RS29045 (NRF21_29045) | 17742..18461 | - | 720 | WP_050597333 | conjugal transfer protein TraP | traP |
| NRF21_RS29050 (NRF21_29050) | 18468..19808 | - | 1341 | WP_032440586 | conjugal transfer protein TraO | traO |
| NRF21_RS29055 (NRF21_29055) | 19812..20915 | - | 1104 | WP_077264204 | DotH/IcmK family type IV secretion protein | traN |
| NRF21_RS29060 (NRF21_29060) | 20926..21594 | - | 669 | WP_032440585 | DotI/IcmL/TraM family protein | traM |
| NRF21_RS29065 (NRF21_29065) | 21666..22019 | - | 354 | WP_032440584 | hypothetical protein | traL |
| NRF21_RS29070 (NRF21_29070) | 22053..25466 | - | 3414 | WP_052145516 | LPD7 domain-containing protein | - |
| NRF21_RS29075 (NRF21_29075) | 25484..25750 | - | 267 | WP_032440577 | IcmT/TraK family protein | traK |
| NRF21_RS29080 (NRF21_29080) | 25747..26934 | - | 1188 | WP_077255878 | plasmid transfer ATPase TraJ | virB11 |
| NRF21_RS29085 (NRF21_29085) | 26912..27730 | - | 819 | WP_032440576 | type IV secretory system conjugative DNA transfer family protein | traI |
| NRF21_RS29090 (NRF21_29090) | 27727..28191 | - | 465 | WP_225546581 | DotD/TraH family lipoprotein | - |
| NRF21_RS29095 (NRF21_29095) | 28217..28696 | - | 480 | WP_032440574 | lytic transglycosylase domain-containing protein | - |
| NRF21_RS29100 (NRF21_29100) | 29428..29655 | - | 228 | WP_032440573 | hypothetical protein | - |
| NRF21_RS29105 (NRF21_29105) | 30265..31107 | + | 843 | WP_032440572 | helix-turn-helix domain-containing protein | - |
| NRF21_RS29110 (NRF21_29110) | 31167..32096 | + | 930 | WP_032440581 | hypothetical protein | - |
| NRF21_RS29115 (NRF21_29115) | 32089..32583 | + | 495 | WP_032440571 | molybdopterin-dependent oxidoreductase | - |