T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 45613..54703
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RA221_RS27325 (RA221_27295) | 41644..41877 | - | 234 | WP_001191890 | hypothetical protein | - |
| RA221_RS27330 (RA221_27300) | 41859..42476 | - | 618 | WP_001249395 | hypothetical protein | - |
| RA221_RS27335 (RA221_27305) | 42644..45616 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| RA221_RS27340 (RA221_27310) | 45613..47478 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| RA221_RS27345 (RA221_27315) | 47528..48073 | + | 546 | WP_000228720 | hypothetical protein | - |
| RA221_RS27350 (RA221_27320) | 48030..48659 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| RA221_RS27355 (RA221_27325) | 48669..49115 | + | 447 | WP_000122507 | hypothetical protein | - |
| RA221_RS27360 (RA221_27330) | 49125..49502 | + | 378 | WP_000869297 | hypothetical protein | - |
| RA221_RS27365 (RA221_27335) | 49502..50164 | + | 663 | WP_001231464 | hypothetical protein | - |
| RA221_RS27370 (RA221_27340) | 50345..50488 | + | 144 | WP_001275801 | hypothetical protein | - |
| RA221_RS27375 (RA221_27345) | 50500..50865 | + | 366 | WP_001052530 | hypothetical protein | - |
| RA221_RS27380 (RA221_27350) | 51010..51291 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| RA221_RS27385 (RA221_27355) | 51288..51914 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| RA221_RS27390 (RA221_27360) | 51898..52815 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| RA221_RS27395 (RA221_27365) | 52815..54128 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| RA221_RS27400 (RA221_27370) | 54125..54703 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| RA221_RS27405 (RA221_27375) | 54707..55099 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| RA221_RS27410 (RA221_27380) | 55384..56646 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| RA221_RS27415 (RA221_27385) | 56970..58115 | + | 1146 | WP_015058212 | class C beta-lactamase CMY-6 | - |
| RA221_RS27420 (RA221_27390) | 58209..58742 | + | 534 | WP_001221666 | lipocalin family protein | - |
| RA221_RS27425 (RA221_27395) | 58739..59056 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| RA221_RS27430 | 59313..59678 | + | 366 | Protein_86 | LuxR family transcriptional regulator | - |