T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 5797..27730
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPJ83_RS29475 (NPJ83_29475) | 1560..2255 | - | 696 | WP_254910806 | RepA family replication protein | - |
| NPJ83_RS29480 (NPJ83_29480) | 2761..3012 | - | 252 | WP_113394424 | hypothetical protein | - |
| NPJ83_RS29485 (NPJ83_29485) | 3024..3557 | - | 534 | WP_032440594 | phospholipase D family protein | - |
| NPJ83_RS29490 (NPJ83_29490) | 3603..5795 | - | 2193 | WP_032440593 | F-type conjugative transfer protein TrbC | - |
| NPJ83_RS29495 (NPJ83_29495) | 5797..6888 | - | 1092 | WP_050597336 | thioredoxin fold domain-containing protein | trbB |
| NPJ83_RS29500 (NPJ83_29500) | 6899..8317 | - | 1419 | WP_063666705 | hypothetical protein | trbA |
| NPJ83_RS29505 (NPJ83_29505) | 8419..9042 | - | 624 | WP_032440592 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NPJ83_RS29510 (NPJ83_29510) | 9108..11252 | - | 2145 | WP_143458320 | DotA/TraY family protein | traY |
| NPJ83_RS29515 (NPJ83_29515) | 11294..11875 | - | 582 | WP_050597335 | conjugal transfer protein TraX | - |
| NPJ83_RS29520 (NPJ83_29520) | 11872..13068 | - | 1197 | WP_032440590 | conjugal transfer protein TraW | traW |
| NPJ83_RS29525 (NPJ83_29525) | 13078..16125 | - | 3048 | WP_032440589 | conjugal transfer protein | traU |
| NPJ83_RS29530 (NPJ83_29530) | 16135..16698 | - | 564 | WP_045325070 | hypothetical protein | traT |
| NPJ83_RS29535 (NPJ83_29535) | 16742..17143 | - | 402 | WP_032440588 | DUF6750 family protein | traR |
| NPJ83_RS29540 (NPJ83_29540) | 17199..17732 | - | 534 | WP_032440587 | conjugal transfer protein TraQ | traQ |
| NPJ83_RS29545 (NPJ83_29545) | 17742..18461 | - | 720 | WP_050597333 | conjugal transfer protein TraP | traP |
| NPJ83_RS29550 (NPJ83_29550) | 18468..19808 | - | 1341 | WP_032440586 | conjugal transfer protein TraO | traO |
| NPJ83_RS29555 (NPJ83_29555) | 19812..20915 | - | 1104 | WP_077264204 | DotH/IcmK family type IV secretion protein | traN |
| NPJ83_RS29560 (NPJ83_29560) | 20926..21594 | - | 669 | WP_032440585 | DotI/IcmL/TraM family protein | traM |
| NPJ83_RS29565 (NPJ83_29565) | 21666..22019 | - | 354 | WP_032440584 | hypothetical protein | traL |
| NPJ83_RS29570 (NPJ83_29570) | 22053..25466 | - | 3414 | WP_052145516 | LPD7 domain-containing protein | - |
| NPJ83_RS29575 (NPJ83_29575) | 25484..25750 | - | 267 | WP_032440577 | IcmT/TraK family protein | traK |
| NPJ83_RS29580 (NPJ83_29580) | 25747..26889 | - | 1143 | WP_032440582 | plasmid transfer ATPase TraJ | virB11 |
| NPJ83_RS29585 (NPJ83_29585) | 26912..27730 | - | 819 | WP_032440576 | type IV secretory system conjugative DNA transfer family protein | traI |
| NPJ83_RS29590 (NPJ83_29590) | 27727..28191 | - | 465 | WP_225546581 | DotD/TraH family lipoprotein | - |
| NPJ83_RS29595 (NPJ83_29595) | 28217..28696 | - | 480 | WP_032440574 | lytic transglycosylase domain-containing protein | - |
| NPJ83_RS29600 (NPJ83_29600) | 29428..29655 | - | 228 | WP_032440573 | hypothetical protein | - |
| NPJ83_RS29605 (NPJ83_29605) | 30265..31107 | + | 843 | WP_032440572 | helix-turn-helix domain-containing protein | - |
| NPJ83_RS29610 (NPJ83_29610) | 31167..32096 | + | 930 | WP_032440581 | hypothetical protein | - |
| NPJ83_RS29615 (NPJ83_29615) | 32089..32583 | + | 495 | WP_032440571 | molybdopterin-dependent oxidoreductase | - |