T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 80316..89986
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDO26_RS36000 (CDO26_35995) | 75316..76635 | - | 1320 | WP_088199079 | plasmid replication protein RepC | - |
| CDO26_RS36005 (CDO26_36000) | 76873..77883 | - | 1011 | WP_167693614 | plasmid partitioning protein RepB | - |
| CDO26_RS36010 (CDO26_36005) | 78107..79327 | - | 1221 | WP_088199144 | plasmid partitioning protein RepA | - |
| CDO26_RS36015 (CDO26_36010) | 79690..80319 | + | 630 | WP_088199081 | acyl-homoserine-lactone synthase TraI | - |
| CDO26_RS36020 (CDO26_36015) | 80316..81287 | + | 972 | WP_088199082 | P-type conjugative transfer ATPase TrbB | virB11 |
| CDO26_RS36025 (CDO26_36020) | 81277..81684 | + | 408 | WP_088199083 | conjugal transfer pilin TrbC | virB2 |
| CDO26_RS36030 (CDO26_36025) | 81677..81976 | + | 300 | WP_088199084 | conjugal transfer protein TrbD | virB3 |
| CDO26_RS36035 (CDO26_36030) | 81987..84455 | + | 2469 | WP_088199085 | conjugal transfer protein TrbE | virb4 |
| CDO26_RS36040 (CDO26_36035) | 84472..85236 | + | 765 | WP_234896413 | P-type conjugative transfer protein TrbJ | virB5 |
| CDO26_RS36045 (CDO26_36040) | 85233..85451 | + | 219 | WP_088199087 | entry exclusion protein TrbK | - |
| CDO26_RS36050 (CDO26_36045) | 85445..86641 | + | 1197 | WP_088199088 | P-type conjugative transfer protein TrbL | virB6 |
| CDO26_RS36055 (CDO26_36050) | 86656..87318 | + | 663 | WP_045023364 | conjugal transfer protein TrbF | virB8 |
| CDO26_RS36060 (CDO26_36055) | 87336..88190 | + | 855 | WP_088199145 | P-type conjugative transfer protein TrbG | virB9 |
| CDO26_RS36065 (CDO26_36060) | 88190..88666 | + | 477 | WP_088199089 | conjugal transfer protein TrbH | - |
| CDO26_RS36070 (CDO26_36065) | 88679..89986 | + | 1308 | WP_088199090 | IncP-type conjugal transfer protein TrbI | virB10 |
| CDO26_RS39450 | 89991..90194 | + | 204 | WP_167693615 | hypothetical protein | - |
| CDO26_RS36080 (CDO26_36075) | 90345..91247 | - | 903 | WP_088199091 | LysR family transcriptional regulator | - |
| CDO26_RS36085 (CDO26_36080) | 91500..92273 | + | 774 | WP_012654959 | nopaline ABC transporter ATP-binding protein NocP | - |
| CDO26_RS36090 (CDO26_36085) | 92339..93190 | + | 852 | WP_088199092 | nopaline ABC transporter substrate-binding protein NocT | - |
| CDO26_RS36095 (CDO26_36090) | 93263..93973 | + | 711 | WP_088199146 | nopaline ABC transporter permease NocQ | - |
| CDO26_RS36100 (CDO26_36095) | 93975..94700 | + | 726 | WP_088199093 | nopaline ABC transporter permease NocM | - |