T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 11785..41398
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QCC15_RS28995 (QCC15_28995) | 6869..7180 | + | 312 | WP_004187333 | hypothetical protein | - |
| QCC15_RS29000 (QCC15_29000) | 7313..7849 | + | 537 | WP_004187332 | hypothetical protein | - |
| QCC15_RS29005 (QCC15_29005) | 8351..8746 | - | 396 | WP_019725163 | hypothetical protein | - |
| QCC15_RS29010 (QCC15_29010) | 8781..9308 | + | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| QCC15_RS29015 (QCC15_29015) | 9295..11274 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| QCC15_RS29020 (QCC15_29020) | 11288..11788 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| QCC15_RS29025 (QCC15_29025) | 11785..12564 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| QCC15_RS29030 (QCC15_29030) | 12575..13738 | + | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| QCC15_RS29035 (QCC15_29035) | 13728..13988 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| QCC15_RS29040 (QCC15_29040) | 14013..15632 | + | 1620 | WP_279482552 | toprim domain-containing protein | - |
| QCC15_RS29045 (QCC15_29045) | 15632..17305 | + | 1674 | WP_227601284 | LPD7 domain-containing protein | - |
| QCC15_RS29050 (QCC15_29050) | 17271..17783 | + | 513 | WP_011091071 | hypothetical protein | traL |
| QCC15_RS29055 (QCC15_29055) | 17784..17981 | - | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| QCC15_RS29060 (QCC15_29060) | 17968..18378 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| QCC15_RS29065 (QCC15_29065) | 18446..18631 | + | 186 | WP_279482555 | hypothetical protein | traM |
| QCC15_RS29070 (QCC15_29070) | 18691..19446 | - | 756 | WP_038423655 | IS21-like element ISEc10 family helper ATPase IstB | - |
| QCC15_RS29075 (QCC15_29075) | 19443..20942 | - | 1500 | WP_004118622 | IS21 family transposase | - |
| QCC15_RS29080 (QCC15_29080) | 21023..21574 | + | 552 | WP_279482562 | DotI/IcmL family type IV secretion protein | traM |
| QCC15_RS29085 (QCC15_29085) | 21583..22734 | + | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| QCC15_RS29090 (QCC15_29090) | 22746..24095 | + | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| QCC15_RS29095 (QCC15_29095) | 24107..24811 | + | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| QCC15_RS29100 (QCC15_29100) | 24835..25365 | + | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| QCC15_RS29105 (QCC15_29105) | 25382..25771 | + | 390 | WP_004187479 | DUF6750 family protein | traR |
| QCC15_RS29110 (QCC15_29110) | 25817..26311 | + | 495 | WP_004187480 | hypothetical protein | - |
| QCC15_RS29115 (QCC15_29115) | 26308..29358 | + | 3051 | WP_004187482 | hypothetical protein | traU |
| QCC15_RS29120 (QCC15_29120) | 29355..30563 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| QCC15_RS29125 (QCC15_29125) | 30560..31156 | + | 597 | WP_015060003 | hypothetical protein | - |
| QCC15_RS29130 (QCC15_29130) | 31149..33344 | + | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| QCC15_RS29135 (QCC15_29135) | 33346..33999 | + | 654 | WP_015060005 | hypothetical protein | - |
| QCC15_RS29140 (QCC15_29140) | 34068..34310 | + | 243 | WP_023893611 | IncL/M type plasmid replication protein RepC | - |
| QCC15_RS29145 (QCC15_29145) | 34606..35661 | + | 1056 | WP_015060006 | plasmid replication initiator RepA | - |
| QCC15_RS29150 (QCC15_29150) | 36884..36979 | + | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| QCC15_RS29155 (QCC15_29155) | 37030..39117 | - | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| QCC15_RS29160 (QCC15_29160) | 39130..40080 | - | 951 | WP_004206886 | DsbC family protein | trbB |
| QCC15_RS29165 (QCC15_29165) | 40091..41398 | - | 1308 | WP_015059988 | hypothetical protein | trbA |
| QCC15_RS29170 (QCC15_29170) | 41398..41673 | - | 276 | WP_004206888 | lytic transglycosylase domain-containing protein | - |
| QCC15_RS29175 (QCC15_29175) | 41898..42281 | - | 384 | WP_019725042 | DUF1496 domain-containing protein | - |
| QCC15_RS29180 (QCC15_29180) | 42361..42831 | + | 471 | WP_019725041 | hypothetical protein | - |
| QCC15_RS29185 (QCC15_29185) | 42810..44018 | - | 1209 | WP_001206290 | IS4-like element IS10A family transposase | - |
| QCC15_RS29190 (QCC15_29190) | 44321..45232 | + | 912 | WP_073558213 | LysR family transcriptional regulator | - |
| QCC15_RS29195 (QCC15_29195) | 45534..46331 | - | 798 | WP_015059991 | OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-48 | - |