T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 189185..228074
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATD18_RS24875 | 184247..185314 | + | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |
| ATD18_RS24880 (ATD18_23750) | 185314..185751 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| ATD18_RS24885 (ATD18_23755) | 185765..187447 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| ATD18_RS24890 (ATD18_23760) | 187440..188735 | + | 1296 | WP_058649964 | type 4b pilus protein PilO2 | - |
| ATD18_RS24895 (ATD18_23765) | 188722..189174 | + | 453 | WP_058649963 | type IV pilus biogenesis protein PilP | - |
| ATD18_RS24900 (ATD18_23770) | 189185..190738 | + | 1554 | WP_000362204 | ATPase, T2SS/T4P/T4SS family | virB11 |
| ATD18_RS24905 (ATD18_23775) | 190751..191836 | + | 1086 | WP_001208803 | type II secretion system F family protein | - |
| ATD18_RS24910 (ATD18_23780) | 191853..192467 | + | 615 | WP_000908228 | type 4 pilus major pilin | - |
| ATD18_RS24915 (ATD18_23785) | 192477..193037 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| ATD18_RS24920 (ATD18_23790) | 193022..193678 | + | 657 | WP_001193551 | A24 family peptidase | - |
| ATD18_RS24925 (ATD18_23795) | 193678..194970 | + | 1293 | WP_039719938 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| ATD18_RS26850 | 194967..195215 | - | 249 | WP_001349157 | hypothetical protein | - |
| ATD18_RS24940 (ATD18_23800) | 195905..197059 | + | 1155 | WP_001139955 | site-specific integrase | - |
| ATD18_RS24945 (ATD18_23805) | 197210..198034 | + | 825 | WP_058649947 | conjugal transfer protein TraE | traE |
| ATD18_RS24950 (ATD18_23810) | 198120..199322 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| ATD18_RS24955 (ATD18_23815) | 199382..199966 | + | 585 | WP_000977520 | histidine phosphatase family protein | - |
| ATD18_RS24960 (ATD18_23820) | 200361..200819 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| ATD18_RS24965 (ATD18_23825) | 200816..201634 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| ATD18_RS24970 (ATD18_23830) | 201631..202779 | + | 1149 | WP_001024976 | plasmid transfer ATPase TraJ | virB11 |
| ATD18_RS24975 | 202776..203066 | + | 291 | WP_001299214 | hypothetical protein | traK |
| ATD18_RS24980 (ATD18_23835) | 203081..203632 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| ATD18_RS24985 (ATD18_23840) | 203722..207489 | + | 3768 | WP_058649948 | LPD7 domain-containing protein | - |
| ATD18_RS24990 (ATD18_23845) | 207507..207854 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| ATD18_RS24995 (ATD18_23850) | 207851..208543 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| ATD18_RS25000 (ATD18_23855) | 208554..209537 | + | 984 | WP_021513963 | IncI1-type conjugal transfer protein TraN | traN |
| ATD18_RS25005 (ATD18_23860) | 209540..210829 | + | 1290 | WP_001271994 | conjugal transfer protein TraO | traO |
| ATD18_RS25010 (ATD18_23865) | 210829..211533 | + | 705 | WP_023155244 | IncI1-type conjugal transfer protein TraP | traP |
| ATD18_RS25015 (ATD18_23870) | 211533..212060 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| ATD18_RS25020 (ATD18_23875) | 212111..212515 | + | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| ATD18_RS25025 (ATD18_23880) | 212579..212767 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| ATD18_RS25030 (ATD18_23885) | 212751..213551 | + | 801 | WP_001164792 | IncI1-type conjugal transfer protein TraT | traT |
| ATD18_RS25035 (ATD18_23890) | 213641..216685 | + | 3045 | WP_001024776 | IncI1-type conjugal transfer protein TraU | traU |
| ATD18_RS25040 | 216685..217299 | + | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| ATD18_RS25045 (ATD18_23895) | 217266..218468 | + | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| ATD18_RS25050 (ATD18_23900) | 218497..219081 | + | 585 | WP_001037996 | IncI1-type conjugal transfer protein TraX | - |
| ATD18_RS25055 (ATD18_23905) | 219178..221346 | + | 2169 | WP_058649949 | DotA/TraY family protein | traY |
| ATD18_RS25060 (ATD18_23910) | 221417..222079 | + | 663 | WP_000644796 | plasmid IncI1-type surface exclusion protein ExcA | - |
| ATD18_RS25065 (ATD18_23915) | 222151..222360 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| ATD18_RS26855 | 222752..222928 | + | 177 | WP_001054897 | hypothetical protein | - |
| ATD18_RS27265 | 222993..223088 | - | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| ATD18_RS25075 (ATD18_23925) | 223589..223840 | + | 252 | WP_001291964 | hypothetical protein | - |
| ATD18_RS25080 (ATD18_23930) | 223912..224064 | - | 153 | WP_001387489 | Hok/Gef family protein | - |
| ATD18_RS25085 (ATD18_23935) | 224691..225470 | + | 780 | WP_275450201 | protein FinQ | - |
| ATD18_RS25090 (ATD18_23940) | 225777..226985 | + | 1209 | WP_001383960 | IncI1-type conjugal transfer protein TrbA | trbA |
| ATD18_RS25095 (ATD18_23945) | 227004..228074 | + | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| ATD18_RS25100 (ATD18_23950) | 228067..230358 | + | 2292 | WP_001289275 | F-type conjugative transfer protein TrbC | - |