T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 20738..39934
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM373_RS27745 (AM373_27600) | 16721..17254 | + | 534 | Protein_21 | IS110-like element IS4321 family transposase | - |
| AM373_RS27750 (AM373_27605) | 18426..19493 | - | 1068 | WP_020316718 | plasmid replication initiator RepA | - |
| AM373_RS27755 (AM373_27610) | 19778..20008 | - | 231 | WP_004187496 | IncL/M type plasmid replication protein RepC | - |
| AM373_RS27760 (AM373_27615) | 20082..20735 | - | 654 | WP_004206935 | hypothetical protein | - |
| AM373_RS27765 (AM373_27620) | 20738..22918 | - | 2181 | WP_004187492 | DotA/TraY family protein | traY |
| AM373_RS27770 (AM373_27625) | 22911..23561 | - | 651 | WP_004187488 | hypothetical protein | - |
| AM373_RS27775 (AM373_27630) | 23558..24766 | - | 1209 | WP_004187486 | conjugal transfer protein TraW | traW |
| AM373_RS27780 (AM373_27635) | 24763..27813 | - | 3051 | WP_011154474 | conjugative transfer protein | traU |
| AM373_RS27785 (AM373_27640) | 27810..28304 | - | 495 | WP_004187480 | hypothetical protein | - |
| AM373_RS27790 (AM373_27645) | 28350..28739 | - | 390 | WP_011154472 | DUF6750 family protein | traR |
| AM373_RS27795 (AM373_27650) | 28756..29286 | - | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| AM373_RS27800 (AM373_27655) | 29310..30014 | - | 705 | WP_004206933 | conjugal transfer protein TraP | traP |
| AM373_RS27805 (AM373_27660) | 30026..31375 | - | 1350 | WP_004206932 | conjugal transfer protein TraO | traO |
| AM373_RS27810 (AM373_27665) | 31387..32538 | - | 1152 | WP_015062843 | DotH/IcmK family type IV secretion protein | traN |
| AM373_RS27815 (AM373_27670) | 32547..33260 | - | 714 | WP_223294958 | DotI/IcmL family type IV secretion protein | traM |
| AM373_RS27820 (AM373_27675) | 33328..33738 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| AM373_RS27825 (AM373_27680) | 33767..33922 | + | 156 | WP_172693602 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| AM373_RS27830 (AM373_27685) | 33923..34435 | - | 513 | WP_011091071 | hypothetical protein | traL |
| AM373_RS29375 | 34401..37706 | - | 3306 | WP_227516140 | LPD7 domain-containing protein | - |
| AM373_RS27840 (AM373_27695) | 37731..37991 | - | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| AM373_RS27845 (AM373_27700) | 37981..39144 | - | 1164 | WP_004206926 | plasmid transfer ATPase TraJ | virB11 |
| AM373_RS27850 (AM373_27705) | 39155..39934 | - | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| AM373_RS27855 (AM373_27710) | 39931..40431 | - | 501 | WP_004206925 | DotD/TraH family lipoprotein | - |
| AM373_RS27860 (AM373_27715) | 40445..42424 | - | 1980 | WP_004206924 | TraI/MobA(P) family conjugative relaxase | - |
| AM373_RS27865 (AM373_27720) | 42411..42728 | - | 318 | WP_004206923 | plasmid mobilization protein MobA | - |
| AM373_RS27870 (AM373_27725) | 43004..43300 | + | 297 | WP_227520851 | MobC | - |
| AM373_RS29380 | 43867..44022 | - | 156 | WP_227520852 | hypothetical protein | - |