T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 32428..57532
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTQ50_RS00215 | 28468..28701 | - | 234 | WP_039272424 | hypothetical protein | - |
| HTQ50_RS00220 | 28683..29165 | - | 483 | WP_228279876 | hypothetical protein | - |
| HTQ50_RS00225 | 29468..32431 | + | 2964 | WP_058662807 | MobH family relaxase | - |
| HTQ50_RS00230 | 32428..34293 | + | 1866 | WP_000178858 | conjugative transfer system coupling protein TraD | virb4 |
| HTQ50_RS00235 | 34304..34888 | + | 585 | WP_000332867 | hypothetical protein | - |
| HTQ50_RS00240 | 34845..35474 | + | 630 | WP_000743448 | DUF4400 domain-containing protein | tfc7 |
| HTQ50_RS00245 | 35500..35931 | + | 432 | WP_228279870 | hypothetical protein | - |
| HTQ50_RS00250 | 35941..36318 | + | 378 | WP_000869260 | hypothetical protein | - |
| HTQ50_RS00255 | 36318..36980 | + | 663 | WP_039272419 | hypothetical protein | - |
| HTQ50_RS00260 | 37159..37302 | + | 144 | WP_168199038 | hypothetical protein | - |
| HTQ50_RS00265 | 37315..37662 | + | 348 | WP_039272417 | hypothetical protein | - |
| HTQ50_RS00270 | 37805..38086 | + | 282 | WP_000805626 | type IV conjugative transfer system protein TraL | traL |
| HTQ50_RS00275 | 38083..38709 | + | 627 | WP_039272415 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HTQ50_RS00280 | 38693..39610 | + | 918 | WP_012766326 | type-F conjugative transfer system secretin TraK | traK |
| HTQ50_RS00285 | 39607..40923 | + | 1317 | WP_039272412 | TraB/VirB10 family protein | traB |
| HTQ50_RS00290 | 40920..41498 | + | 579 | WP_039272410 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTQ50_RS00295 | 41502..41894 | + | 393 | WP_012766327 | TraA family conjugative transfer protein | - |
| HTQ50_RS00300 | 42095..47581 | + | 5487 | WP_039272407 | Ig-like domain-containing protein | - |
| HTQ50_RS00305 | 47730..48437 | + | 708 | WP_001259344 | DsbC family protein | - |
| HTQ50_RS00310 | 48434..50881 | + | 2448 | WP_051479468 | type IV secretion system protein TraC | virb4 |
| HTQ50_RS00315 | 50896..51213 | + | 318 | WP_000364398 | hypothetical protein | - |
| HTQ50_RS00320 | 51210..51740 | + | 531 | WP_000672456 | S26 family signal peptidase | - |
| HTQ50_RS00325 | 51703..52971 | + | 1269 | WP_039272404 | TrbC family F-type conjugative pilus assembly protein | traW |
| HTQ50_RS00330 | 52968..53645 | + | 678 | WP_039272402 | EAL domain-containing protein | - |
| HTQ50_RS00335 | 53651..54643 | + | 993 | WP_236901774 | TraU family protein | traU |
| HTQ50_RS00340 | 54794..57532 | + | 2739 | WP_058662805 | conjugal transfer mating pair stabilization protein TraN | traN |
| HTQ50_RS00345 | 57571..58431 | - | 861 | WP_000679674 | hypothetical protein | - |
| HTQ50_RS00350 | 58543..59193 | - | 651 | WP_000796641 | hypothetical protein | - |
| HTQ50_RS00355 | 59485..59805 | + | 321 | WP_012766334 | hypothetical protein | - |
| HTQ50_RS00360 | 60116..60301 | + | 186 | WP_001186892 | hypothetical protein | - |
| HTQ50_RS00365 | 60522..61490 | + | 969 | WP_001553257 | AAA family ATPase | - |
| HTQ50_RS00370 | 61631..62407 | + | 777 | WP_228279871 | hypothetical protein | - |