T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 32428..57532
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OPR78_RS25495 (OPR78_25485) | 28468..28701 | - | 234 | WP_039272424 | hypothetical protein | - |
| OPR78_RS25500 (OPR78_25490) | 28683..29300 | - | 618 | WP_012766323 | hypothetical protein | - |
| OPR78_RS25505 (OPR78_25495) | 29468..32431 | + | 2964 | WP_058662807 | MobH family relaxase | - |
| OPR78_RS25510 (OPR78_25500) | 32428..34293 | + | 1866 | WP_000178858 | conjugative transfer system coupling protein TraD | virb4 |
| OPR78_RS25515 (OPR78_25505) | 34343..34888 | + | 546 | WP_023356350 | hypothetical protein | - |
| OPR78_RS25520 (OPR78_25510) | 34845..35474 | + | 630 | WP_000743448 | DUF4400 domain-containing protein | tfc7 |
| OPR78_RS25525 (OPR78_25515) | 35485..35931 | + | 447 | WP_039272421 | hypothetical protein | - |
| OPR78_RS25530 (OPR78_25520) | 35941..36318 | + | 378 | WP_000869260 | hypothetical protein | - |
| OPR78_RS25535 (OPR78_25525) | 36318..36980 | + | 663 | WP_039272419 | hypothetical protein | - |
| OPR78_RS25540 (OPR78_25530) | 37159..37302 | + | 144 | WP_168199038 | hypothetical protein | - |
| OPR78_RS25545 (OPR78_25535) | 37315..37662 | + | 348 | WP_039272417 | hypothetical protein | - |
| OPR78_RS25550 (OPR78_25540) | 37805..38086 | + | 282 | WP_000805626 | type IV conjugative transfer system protein TraL | traL |
| OPR78_RS25555 (OPR78_25545) | 38083..38709 | + | 627 | WP_039272415 | TraE/TraK family type IV conjugative transfer system protein | traE |
| OPR78_RS25560 (OPR78_25550) | 38693..39610 | + | 918 | WP_012766326 | type-F conjugative transfer system secretin TraK | traK |
| OPR78_RS25565 (OPR78_25555) | 39607..40923 | + | 1317 | WP_039272412 | TraB/VirB10 family protein | traB |
| OPR78_RS25570 (OPR78_25560) | 40920..41498 | + | 579 | WP_039272410 | type IV conjugative transfer system lipoprotein TraV | traV |
| OPR78_RS25575 (OPR78_25565) | 41502..41894 | + | 393 | WP_012766327 | TraA family conjugative transfer protein | - |
| OPR78_RS25580 (OPR78_25570) | 42095..47581 | + | 5487 | WP_039272407 | Ig-like domain-containing protein | - |
| OPR78_RS25585 (OPR78_25575) | 47730..48437 | + | 708 | WP_001259344 | DsbC family protein | - |
| OPR78_RS25590 (OPR78_25580) | 48434..50881 | + | 2448 | WP_051479468 | type IV secretion system protein TraC | virb4 |
| OPR78_RS25595 (OPR78_25585) | 50896..51213 | + | 318 | WP_000364398 | hypothetical protein | - |
| OPR78_RS25600 (OPR78_25590) | 51210..51740 | + | 531 | WP_000672456 | S26 family signal peptidase | - |
| OPR78_RS25605 (OPR78_25595) | 51703..52971 | + | 1269 | WP_039272404 | TrbC family F-type conjugative pilus assembly protein | traW |
| OPR78_RS25610 (OPR78_25600) | 52968..53645 | + | 678 | WP_039272402 | EAL domain-containing protein | - |
| OPR78_RS25615 (OPR78_25605) | 53639..54643 | + | 1005 | WP_000911304 | TraU family protein | traU |
| OPR78_RS25620 (OPR78_25610) | 54794..57532 | + | 2739 | WP_058662805 | conjugal transfer mating pair stabilization protein TraN | traN |
| OPR78_RS25625 (OPR78_25615) | 57571..58431 | - | 861 | WP_000679674 | hypothetical protein | - |
| OPR78_RS25630 (OPR78_25620) | 58543..59193 | - | 651 | WP_000796641 | hypothetical protein | - |
| OPR78_RS25635 (OPR78_25625) | 59485..59805 | + | 321 | WP_012766334 | hypothetical protein | - |
| OPR78_RS25640 (OPR78_25630) | 60050..60301 | + | 252 | WP_226453752 | hypothetical protein | - |
| OPR78_RS25645 (OPR78_25635) | 60522..61490 | + | 969 | WP_001553257 | AAA family ATPase | - |
| OPR78_RS25650 (OPR78_25640) | 61502..62407 | + | 906 | WP_058662804 | hypothetical protein | - |