T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 68371..75755
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM390_RS29805 (AM390_29650) | 63749..64174 | + | 426 | WP_000422741 | transposase | - |
| AM390_RS29810 (AM390_29655) | 64171..64521 | + | 351 | WP_000624722 | IS66 family insertion sequence element accessory protein TnpB | - |
| AM390_RS29815 (AM390_29660) | 64552..66165 | + | 1614 | WP_000080200 | IS66-like element ISEc23 family transposase | - |
| AM390_RS30730 | 66250..66546 | - | 297 | Protein_75 | hypothetical protein | - |
| AM390_RS29835 (AM390_29680) | 66846..67142 | + | 297 | WP_001272251 | hypothetical protein | - |
| AM390_RS29840 (AM390_29685) | 67253..68074 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| AM390_RS29845 (AM390_29690) | 68371..68961 | - | 591 | WP_000252683 | transglycosylase SLT domain-containing protein | virB1 |
| AM390_RS29850 (AM390_29695) | 69296..69679 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| AM390_RS29855 (AM390_29700) | 69873..70544 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| AM390_RS29860 (AM390_29705) | 70681..70908 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| AM390_RS29865 (AM390_29710) | 70941..71300 | + | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| AM390_RS29870 (AM390_29715) | 71315..71626 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| AM390_RS29875 (AM390_29720) | 71648..72214 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| AM390_RS29880 (AM390_29725) | 72201..72929 | + | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| AM390_RS29885 (AM390_29730) | 72929..74380 | + | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| AM390_RS29890 (AM390_29735) | 74370..74936 | + | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| AM390_RS29895 (AM390_29740) | 74923..75243 | + | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| AM390_RS29900 (AM390_29745) | 75240..75755 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| AM390_RS29905 (AM390_29750) | 75890..76111 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| AM390_RS29910 (AM390_29755) | 76104..76580 | + | 477 | WP_000549587 | hypothetical protein | - |
| AM390_RS29915 (AM390_29760) | 76660..76878 | + | 219 | WP_000556745 | hypothetical protein | - |
| AM390_RS29920 (AM390_29765) | 76906..77253 | + | 348 | WP_000836682 | hypothetical protein | - |