T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48240..57330
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ04_RS23750 (PQQ04_23750) | 44271..44504 | - | 234 | WP_001191890 | hypothetical protein | - |
| PQQ04_RS23755 (PQQ04_23755) | 44486..45103 | - | 618 | WP_001249395 | hypothetical protein | - |
| PQQ04_RS23760 (PQQ04_23760) | 45271..48243 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| PQQ04_RS23765 (PQQ04_23765) | 48240..50105 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| PQQ04_RS23770 (PQQ04_23770) | 50155..50700 | + | 546 | WP_000228720 | hypothetical protein | - |
| PQQ04_RS23775 (PQQ04_23775) | 50657..51286 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| PQQ04_RS23780 (PQQ04_23780) | 51296..51742 | + | 447 | WP_000122507 | hypothetical protein | - |
| PQQ04_RS23785 (PQQ04_23785) | 51752..52129 | + | 378 | WP_000869297 | hypothetical protein | - |
| PQQ04_RS23790 (PQQ04_23790) | 52129..52791 | + | 663 | WP_001231464 | hypothetical protein | - |
| PQQ04_RS23795 (PQQ04_23795) | 53127..53492 | + | 366 | WP_001052530 | hypothetical protein | - |
| PQQ04_RS23800 (PQQ04_23800) | 53637..53918 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| PQQ04_RS23805 (PQQ04_23805) | 53915..54541 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| PQQ04_RS23810 (PQQ04_23810) | 54525..55442 | + | 918 | WP_274895173 | type-F conjugative transfer system secretin TraK | traK |
| PQQ04_RS23815 (PQQ04_23815) | 55442..56755 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| PQQ04_RS23820 (PQQ04_23820) | 56752..57330 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| PQQ04_RS23825 (PQQ04_23825) | 57334..57726 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| PQQ04_RS23830 (PQQ04_23830) | 58011..59273 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| PQQ04_RS23835 (PQQ04_23835) | 59597..60742 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| PQQ04_RS23840 (PQQ04_23840) | 60836..61369 | + | 534 | WP_001221666 | lipocalin family protein | - |
| PQQ04_RS23845 (PQQ04_23845) | 61366..61683 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |