T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48240..57330
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ16_RS23940 (PQQ16_23940) | 44271..44504 | - | 234 | WP_001191890 | hypothetical protein | - |
| PQQ16_RS23945 (PQQ16_23945) | 44486..45103 | - | 618 | WP_001249395 | hypothetical protein | - |
| PQQ16_RS23950 (PQQ16_23950) | 45271..48243 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| PQQ16_RS23955 (PQQ16_23955) | 48240..50105 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| PQQ16_RS23960 (PQQ16_23960) | 50155..50700 | + | 546 | WP_000228720 | hypothetical protein | - |
| PQQ16_RS23965 (PQQ16_23965) | 50657..51286 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| PQQ16_RS23970 (PQQ16_23970) | 51296..51742 | + | 447 | WP_000122507 | hypothetical protein | - |
| PQQ16_RS23975 (PQQ16_23975) | 51752..52129 | + | 378 | WP_000869297 | hypothetical protein | - |
| PQQ16_RS23980 (PQQ16_23980) | 52129..52791 | + | 663 | WP_001231464 | hypothetical protein | - |
| PQQ16_RS23985 (PQQ16_23985) | 53127..53492 | + | 366 | WP_001052530 | hypothetical protein | - |
| PQQ16_RS23990 (PQQ16_23990) | 53637..53918 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| PQQ16_RS23995 (PQQ16_23995) | 53915..54541 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| PQQ16_RS24000 (PQQ16_24000) | 54525..55442 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| PQQ16_RS24005 (PQQ16_24005) | 55442..56755 | + | 1314 | WP_274890352 | TrbI/VirB10 family protein | traB |
| PQQ16_RS24010 (PQQ16_24010) | 56752..57330 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| PQQ16_RS24015 (PQQ16_24015) | 57334..57726 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| PQQ16_RS24020 (PQQ16_24020) | 58011..59273 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| PQQ16_RS24025 (PQQ16_24025) | 59597..60742 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| PQQ16_RS24030 (PQQ16_24030) | 60836..61369 | + | 534 | WP_001221666 | lipocalin family protein | - |
| PQQ16_RS24035 (PQQ16_24035) | 61366..61683 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |