T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 44949..64193
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0887_RS30985 (D0887_30985) | 40033..40344 | + | 312 | WP_004187333 | hypothetical protein | - |
| D0887_RS30990 (D0887_30990) | 40477..41013 | + | 537 | WP_004187332 | hypothetical protein | - |
| D0887_RS30995 (D0887_30995) | 41515..41910 | - | 396 | WP_019725163 | hypothetical protein | - |
| D0887_RS33220 | 41945..42472 | + | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| D0887_RS31005 (D0887_31005) | 42459..44438 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| D0887_RS31010 (D0887_31010) | 44452..44952 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| D0887_RS31015 (D0887_31015) | 44949..45728 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| D0887_RS31020 (D0887_31020) | 45739..46902 | + | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| D0887_RS31025 (D0887_31025) | 46892..47152 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| D0887_RS33225 | 47177..50569 | + | 3393 | WP_223216381 | LPD7 domain-containing protein | - |
| D0887_RS31035 (D0887_31035) | 50535..51047 | + | 513 | WP_011091071 | hypothetical protein | traL |
| D0887_RS31040 (D0887_31040) | 51048..51203 | - | 156 | WP_172693602 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| D0887_RS31045 (D0887_31045) | 51232..51642 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| D0887_RS31050 (D0887_31050) | 51710..52423 | + | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| D0887_RS31060 (D0887_31060) | 52432..53583 | + | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| D0887_RS31065 (D0887_31065) | 53595..54944 | + | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| D0887_RS31070 (D0887_31070) | 54956..55660 | + | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| D0887_RS31075 (D0887_31075) | 55684..56214 | + | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| D0887_RS31080 (D0887_31080) | 56231..56620 | + | 390 | WP_004187479 | DUF6750 family protein | traR |
| D0887_RS31085 (D0887_31085) | 56666..57160 | + | 495 | WP_004187480 | hypothetical protein | - |
| D0887_RS31090 (D0887_31090) | 57157..60207 | + | 3051 | WP_004187482 | hypothetical protein | traU |
| D0887_RS31095 (D0887_31095) | 60204..61412 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| D0887_RS31100 (D0887_31100) | 61409..62005 | + | 597 | WP_015060003 | hypothetical protein | - |
| D0887_RS31105 (D0887_31105) | 61998..64193 | + | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| D0887_RS31110 (D0887_31110) | 64195..64848 | + | 654 | WP_015060005 | hypothetical protein | - |
| D0887_RS31115 (D0887_31115) | 64929..65159 | + | 231 | WP_011091085 | IncL/M type plasmid replication protein RepC | - |