T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 30925..59240
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0887_RS30410 (D0887_30410) | 26915..27349 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| D0887_RS30415 (D0887_30415) | 27346..28065 | + | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| D0887_RS33210 | 28287..28436 | + | 150 | Protein_36 | plasmid maintenance protein Mok | - |
| D0887_RS32705 | 28378..28503 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| D0887_RS32710 | 28804..29100 | - | 297 | Protein_38 | hypothetical protein | - |
| D0887_RS30435 (D0887_30435) | 29400..29696 | + | 297 | WP_001272251 | hypothetical protein | - |
| D0887_RS30440 (D0887_30440) | 29807..30628 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| D0887_RS30445 (D0887_30445) | 30925..31515 | - | 591 | WP_000252683 | transglycosylase SLT domain-containing protein | virB1 |
| D0887_RS30450 (D0887_30450) | 31848..32231 | + | 384 | WP_001151529 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| D0887_RS30455 (D0887_30455) | 32423..33070 | + | 648 | WP_000332523 | transcriptional regulator TraJ family protein | - |
| D0887_RS30460 (D0887_30460) | 33190..33417 | + | 228 | WP_000589556 | conjugal transfer relaxosome protein TraY | - |
| D0887_RS30465 (D0887_30465) | 33451..33813 | + | 363 | WP_012881131 | type IV conjugative transfer system pilin TraA | - |
| D0887_RS30470 (D0887_30470) | 33828..34139 | + | 312 | WP_000012100 | type IV conjugative transfer system protein TraL | traL |
| D0887_RS30475 (D0887_30475) | 34161..34727 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| D0887_RS30480 (D0887_30480) | 34714..35442 | + | 729 | WP_001230769 | type-F conjugative transfer system secretin TraK | traK |
| D0887_RS30485 (D0887_30485) | 35442..36869 | + | 1428 | WP_012881130 | F-type conjugal transfer pilus assembly protein TraB | traB |
| D0887_RS30490 (D0887_30490) | 36859..37449 | + | 591 | WP_012881129 | conjugal transfer pilus-stabilizing protein TraP | - |
| D0887_RS30495 (D0887_30495) | 37436..37756 | + | 321 | WP_012881128 | conjugal transfer protein TrbD | - |
| D0887_RS30500 (D0887_30500) | 37753..38268 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| D0887_RS30505 (D0887_30505) | 38403..38624 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| D0887_RS30510 (D0887_30510) | 38617..39093 | + | 477 | WP_012881127 | hypothetical protein | - |
| D0887_RS30515 (D0887_30515) | 39192..39410 | + | 219 | WP_000556745 | hypothetical protein | - |
| D0887_RS30520 (D0887_30520) | 39438..39785 | + | 348 | WP_000836682 | hypothetical protein | - |
| D0887_RS30525 (D0887_30525) | 39911..42541 | + | 2631 | WP_000069772 | type IV secretion system protein TraC | virb4 |
| D0887_RS30530 (D0887_30530) | 42538..42924 | + | 387 | WP_117389473 | type-F conjugative transfer system protein TrbI | - |
| D0887_RS30535 (D0887_30535) | 42921..43553 | + | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| D0887_RS30540 (D0887_30540) | 43550..44542 | + | 993 | WP_000830849 | conjugal transfer pilus assembly protein TraU | traU |
| D0887_RS30545 (D0887_30545) | 44572..44877 | + | 306 | WP_000224418 | hypothetical protein | - |
| D0887_RS30550 (D0887_30550) | 44886..45524 | + | 639 | WP_015058995 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| D0887_RS30555 (D0887_30555) | 45521..47371 | + | 1851 | WP_117389471 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| D0887_RS30560 (D0887_30560) | 47398..47655 | + | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| D0887_RS30565 (D0887_30565) | 47642..48391 | + | 750 | WP_001336806 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| D0887_RS30570 (D0887_30570) | 48405..48746 | + | 342 | WP_000556795 | conjugal transfer protein TrbA | - |
| D0887_RS30575 (D0887_30575) | 48727..49062 | - | 336 | WP_000736414 | hypothetical protein | - |
| D0887_RS30580 (D0887_30580) | 49143..49427 | + | 285 | WP_000624107 | type-F conjugative transfer system pilin chaperone TraQ | - |
| D0887_RS30585 (D0887_30585) | 49414..49959 | + | 546 | WP_000059830 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| D0887_RS30590 (D0887_30590) | 49889..50236 | + | 348 | WP_011666494 | P-type conjugative transfer protein TrbJ | - |
| D0887_RS30595 (D0887_30595) | 50217..50609 | + | 393 | WP_000659962 | F-type conjugal transfer protein TrbF | - |
| D0887_RS30600 (D0887_30600) | 50596..51969 | + | 1374 | WP_000944331 | conjugal transfer pilus assembly protein TraH | traH |
| D0887_RS30605 (D0887_30605) | 51966..54791 | + | 2826 | WP_012881124 | conjugal transfer mating-pair stabilization protein TraG | traG |
| D0887_RS30610 (D0887_30610) | 54788..55297 | + | 510 | WP_000628111 | conjugal transfer entry exclusion protein TraS | - |
| D0887_RS30615 (D0887_30615) | 55311..56042 | + | 732 | WP_012881123 | conjugal transfer complement resistance protein TraT | - |
| D0887_RS30620 (D0887_30620) | 56245..56982 | + | 738 | WP_012881122 | hypothetical protein | - |
| D0887_RS30625 (D0887_30625) | 57033..59240 | + | 2208 | WP_060578159 | type IV conjugative transfer system coupling protein TraD | virb4 |