T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 107486..136405
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0887_RS28410 (D0887_28410) | 107486..109768 | - | 2283 | WP_086625007 | type IV conjugative transfer system coupling protein TraD | virb4 |
| D0887_RS32530 | 109895..110584 | - | 690 | WP_162881175 | hypothetical protein | - |
| D0887_RS28420 (D0887_28420) | 110777..111508 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| D0887_RS28425 (D0887_28425) | 111701..112228 | - | 528 | WP_094067313 | conjugal transfer protein TraS | - |
| D0887_RS28430 (D0887_28430) | 112234..115083 | - | 2850 | WP_094067297 | conjugal transfer mating-pair stabilization protein TraG | traG |
| D0887_RS28435 (D0887_28435) | 115083..116462 | - | 1380 | WP_162881176 | conjugal transfer pilus assembly protein TraH | traH |
| D0887_RS28440 (D0887_28440) | 116440..116883 | - | 444 | WP_094067299 | F-type conjugal transfer protein TrbF | - |
| D0887_RS28445 (D0887_28445) | 116929..117486 | - | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| D0887_RS28450 (D0887_28450) | 117458..117697 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| D0887_RS28455 (D0887_28455) | 117708..118460 | - | 753 | WP_094067300 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| D0887_RS28460 (D0887_28460) | 118481..118807 | - | 327 | WP_086625003 | hypothetical protein | - |
| D0887_RS28465 (D0887_28465) | 118820..119068 | - | 249 | WP_004152675 | hypothetical protein | - |
| D0887_RS28470 (D0887_28470) | 119046..119300 | - | 255 | WP_094067301 | conjugal transfer protein TrbE | - |
| D0887_RS28475 (D0887_28475) | 119332..121287 | - | 1956 | WP_086625001 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| D0887_RS28480 (D0887_28480) | 121346..121993 | - | 648 | WP_015632510 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| D0887_RS28485 (D0887_28485) | 122269..123258 | - | 990 | WP_094067302 | conjugal transfer pilus assembly protein TraU | traU |
| D0887_RS28490 (D0887_28490) | 123255..123656 | - | 402 | WP_004194979 | hypothetical protein | - |
| D0887_RS28495 (D0887_28495) | 123691..124326 | - | 636 | WP_020325113 | type-F conjugative transfer system protein TraW | traW |
| D0887_RS28500 (D0887_28500) | 124326..124715 | - | 390 | WP_094067303 | type-F conjugative transfer system protein TrbI | - |
| D0887_RS28505 (D0887_28505) | 124715..127354 | - | 2640 | WP_094067304 | type IV secretion system protein TraC | virb4 |
| D0887_RS28510 (D0887_28510) | 127426..127824 | - | 399 | WP_162881177 | hypothetical protein | - |
| D0887_RS28515 (D0887_28515) | 127849..128253 | - | 405 | WP_094067306 | hypothetical protein | - |
| D0887_RS28520 (D0887_28520) | 128320..128631 | - | 312 | WP_094067307 | hypothetical protein | - |
| D0887_RS28525 (D0887_28525) | 128632..128850 | - | 219 | WP_086624994 | hypothetical protein | - |
| D0887_RS28535 (D0887_28535) | 129174..129758 | - | 585 | WP_086624992 | type IV conjugative transfer system lipoprotein TraV | traV |
| D0887_RS28540 (D0887_28540) | 129781..130377 | - | 597 | WP_094067308 | conjugal transfer pilus-stabilizing protein TraP | - |
| D0887_RS28545 (D0887_28545) | 130370..131794 | - | 1425 | WP_094067309 | F-type conjugal transfer pilus assembly protein TraB | traB |
| D0887_RS28550 (D0887_28550) | 131794..132534 | - | 741 | WP_094067310 | type-F conjugative transfer system secretin TraK | traK |
| D0887_RS28555 (D0887_28555) | 132521..133087 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| D0887_RS28560 (D0887_28560) | 133107..133412 | - | 306 | WP_094067311 | type IV conjugative transfer system protein TraL | traL |
| D0887_RS28565 (D0887_28565) | 133426..133794 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| D0887_RS28570 (D0887_28570) | 133856..134062 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| D0887_RS28575 (D0887_28575) | 134195..134914 | - | 720 | WP_159049099 | conjugal transfer protein TrbJ | - |
| D0887_RS28580 (D0887_28580) | 135113..135529 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| D0887_RS28585 (D0887_28585) | 135920..136405 | + | 486 | WP_064172160 | transglycosylase SLT domain-containing protein | virB1 |
| D0887_RS28590 (D0887_28590) | 136438..136767 | - | 330 | WP_094067312 | DUF5983 family protein | - |
| D0887_RS28595 (D0887_28595) | 136800..137621 | - | 822 | WP_048276959 | DUF932 domain-containing protein | - |
| D0887_RS28605 (D0887_28605) | 138249..138599 | - | 351 | WP_004152758 | hypothetical protein | - |
| D0887_RS28610 (D0887_28610) | 138596..138868 | - | 273 | WP_094067335 | hypothetical protein | - |
| D0887_RS28615 (D0887_28615) | 139562..139681 | - | 120 | WP_159376494 | type I toxin-antitoxin system Hok family toxin | - |
| D0887_RS33180 | 139626..139778 | - | 153 | WP_004150508 | DUF5431 family protein | - |
| D0887_RS28625 (D0887_28625) | 139948..140322 | - | 375 | WP_094067337 | hypothetical protein | - |
| D0887_RS28630 (D0887_28630) | 140378..140704 | - | 327 | WP_094067338 | theronine dehydrogenase | - |