T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 53432..84179
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM408_RS26915 | 48604..48900 | - | 297 | Protein_60 | hypothetical protein | - |
| AM408_RS26070 (AM408_25935) | 49200..49496 | + | 297 | WP_001272251 | hypothetical protein | - |
| AM408_RS26075 (AM408_25940) | 49607..50428 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| AM408_RS26085 (AM408_25950) | 50506..52077 | - | 1572 | WP_000381395 | IS66-like element ISCro1 family transposase | - |
| AM408_RS26090 (AM408_25955) | 52097..52444 | - | 348 | WP_000624622 | IS66 family insertion sequence element accessory protein TnpB | - |
| AM408_RS26095 (AM408_25960) | 52444..53121 | - | 678 | WP_001339397 | IS66-like element accessory protein TnpA | - |
| AM408_RS26100 (AM408_25965) | 53432..54034 | - | 603 | WP_000243713 | transglycosylase SLT domain-containing protein | virB1 |
| AM408_RS26105 (AM408_25970) | 54357..54740 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| AM408_RS26110 (AM408_25975) | 54934..55605 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| AM408_RS26115 (AM408_25980) | 55742..55969 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| AM408_RS26120 (AM408_25985) | 56002..56361 | + | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| AM408_RS26125 (AM408_25990) | 56376..56687 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| AM408_RS26130 (AM408_25995) | 56709..57275 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| AM408_RS26135 (AM408_26000) | 57262..57990 | + | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| AM408_RS26140 (AM408_26005) | 57990..59441 | + | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| AM408_RS26145 (AM408_26010) | 59431..59997 | + | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| AM408_RS26150 (AM408_26015) | 59984..60304 | + | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| AM408_RS26155 (AM408_26020) | 60301..60816 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| AM408_RS26160 (AM408_26025) | 60951..61172 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| AM408_RS26165 (AM408_26030) | 61165..61641 | + | 477 | WP_000549587 | hypothetical protein | - |
| AM408_RS26170 (AM408_26035) | 61721..61939 | + | 219 | WP_000556745 | hypothetical protein | - |
| AM408_RS26695 | 61967..62314 | + | 348 | WP_000836682 | hypothetical protein | - |
| AM408_RS26180 (AM408_26045) | 62440..65070 | + | 2631 | WP_000069777 | type IV secretion system protein TraC | virb4 |
| AM408_RS26185 (AM408_26050) | 65067..65453 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| AM408_RS26190 (AM408_26055) | 65450..66082 | + | 633 | WP_001203728 | type-F conjugative transfer system protein TraW | traW |
| AM408_RS26195 (AM408_26060) | 66079..67071 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| AM408_RS26200 (AM408_26065) | 67101..67406 | + | 306 | WP_000224416 | hypothetical protein | - |
| AM408_RS26205 (AM408_26070) | 67415..68053 | + | 639 | WP_001080256 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| AM408_RS26210 (AM408_26075) | 68050..69900 | + | 1851 | WP_087760847 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| AM408_RS26215 (AM408_26080) | 69927..70184 | + | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| AM408_RS26220 (AM408_26085) | 70177..70920 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| AM408_RS26225 (AM408_26090) | 70934..71278 | + | 345 | WP_000556796 | conjugal transfer protein TrbA | - |
| AM408_RS26230 (AM408_26095) | 71397..71681 | + | 285 | WP_000624194 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AM408_RS26235 (AM408_26100) | 71668..72213 | + | 546 | WP_000059831 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| AM408_RS26240 (AM408_26105) | 72143..72490 | + | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| AM408_RS26245 (AM408_26110) | 72471..72863 | + | 393 | WP_000660699 | F-type conjugal transfer protein TrbF | - |
| AM408_RS26250 (AM408_26115) | 72850..74223 | + | 1374 | WP_000944331 | conjugal transfer pilus assembly protein TraH | traH |
| AM408_RS26255 (AM408_26120) | 74220..77042 | + | 2823 | WP_001007039 | conjugal transfer mating-pair stabilization protein TraG | traG |
| AM408_RS26260 (AM408_26125) | 77064..77396 | + | 333 | Protein_98 | surface exclusion protein | - |
| AM408_RS26265 (AM408_26130) | 77589..79130 | + | 1542 | WP_002431311 | IS21-like element ISEc12 family transposase | - |
| AM408_RS26270 (AM408_26135) | 79145..79891 | + | 747 | WP_001016257 | IS21-like element ISEc12 family helper ATPase IstB | - |
| AM408_RS27275 | 79977..80129 | + | 153 | Protein_101 | surface exclusion protein | - |
| AM408_RS26275 (AM408_26140) | 80178..80909 | + | 732 | WP_000782451 | conjugal transfer complement resistance protein TraT | - |
| AM408_RS26280 (AM408_26145) | 81112..81849 | + | 738 | WP_000199905 | hypothetical protein | - |
| AM408_RS26285 (AM408_26150) | 81900..84179 | + | 2280 | WP_087760849 | type IV conjugative transfer system coupling protein TraD | prgC |