T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 7777..16867
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM405_RS18750 (AM405_18760) | 7381..7773 | - | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| AM405_RS18755 (AM405_18765) | 7777..8355 | - | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| AM405_RS18760 (AM405_18770) | 8352..9665 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| AM405_RS18765 (AM405_18775) | 9665..10582 | - | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| AM405_RS18770 (AM405_18780) | 10566..11192 | - | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| AM405_RS18775 (AM405_18785) | 11189..11470 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| AM405_RS18780 (AM405_18790) | 11615..11980 | - | 366 | WP_001052530 | hypothetical protein | - |
| AM405_RS20000 | 11992..12135 | - | 144 | WP_001275801 | hypothetical protein | - |
| AM405_RS18785 (AM405_18795) | 12316..12978 | - | 663 | WP_001231464 | hypothetical protein | - |
| AM405_RS18790 (AM405_18800) | 12978..13355 | - | 378 | WP_000869297 | hypothetical protein | - |
| AM405_RS20005 | 13597..13773 | - | 177 | WP_169342285 | hypothetical protein | - |
| AM405_RS18800 (AM405_18810) | 13821..14450 | - | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| AM405_RS18805 (AM405_18815) | 14407..14952 | - | 546 | WP_000228720 | hypothetical protein | - |
| AM405_RS18810 (AM405_18820) | 15002..16867 | - | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| AM405_RS18815 (AM405_18825) | 16864..19836 | - | 2973 | WP_001326173 | MobH family relaxase | - |
| AM405_RS18820 (AM405_18830) | 20004..20621 | + | 618 | WP_001249395 | hypothetical protein | - |
| AM405_RS18825 (AM405_18835) | 20603..20836 | + | 234 | WP_001191890 | hypothetical protein | - |