T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 60808..89805
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NB672_RS28500 (NB672_28500) | 60808..63120 | - | 2313 | WP_004152620 | type IV conjugative transfer system coupling protein TraD | virb4 |
| NB672_RS28505 (NB672_28505) | 63249..63938 | - | 690 | WP_004198206 | hypothetical protein | - |
| NB672_RS28510 (NB672_28510) | 64130..64861 | - | 732 | WP_004152622 | conjugal transfer complement resistance protein TraT | - |
| NB672_RS28515 (NB672_28515) | 65045..65593 | - | 549 | WP_004152623 | conjugal transfer entry exclusion protein TraS | - |
| NB672_RS28520 (NB672_28520) | 65606..68455 | - | 2850 | WP_004152624 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NB672_RS28525 (NB672_28525) | 68455..69834 | - | 1380 | WP_004165169 | conjugal transfer pilus assembly protein TraH | traH |
| NB672_RS28530 (NB672_28530) | 69812..70255 | - | 444 | WP_004152679 | F-type conjugal transfer protein TrbF | - |
| NB672_RS28535 (NB672_28535) | 70301..70858 | - | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NB672_RS28540 (NB672_28540) | 70830..71069 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NB672_RS28545 (NB672_28545) | 71080..71832 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NB672_RS28550 (NB672_28550) | 71853..72179 | - | 327 | WP_004152676 | hypothetical protein | - |
| NB672_RS28555 (NB672_28555) | 72192..72440 | - | 249 | WP_004152675 | hypothetical protein | - |
| NB672_RS28560 (NB672_28560) | 72418..72672 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| NB672_RS28565 (NB672_28565) | 72704..74659 | - | 1956 | WP_004152673 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NB672_RS28570 (NB672_28570) | 74718..75356 | - | 639 | WP_004152682 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NB672_RS28575 (NB672_28575) | 75369..76358 | - | 990 | WP_011977785 | conjugal transfer pilus assembly protein TraU | traU |
| NB672_RS28580 (NB672_28580) | 76355..76744 | - | 390 | WP_004152508 | hypothetical protein | - |
| NB672_RS28585 (NB672_28585) | 76786..77412 | - | 627 | WP_004152507 | type-F conjugative transfer system protein TraW | traW |
| NB672_RS28590 (NB672_28590) | 77412..77801 | - | 390 | WP_004152506 | type-F conjugative transfer system protein TrbI | - |
| NB672_RS28595 (NB672_28595) | 77801..80440 | - | 2640 | WP_004152505 | type IV secretion system protein TraC | virb4 |
| NB672_RS28600 (NB672_28600) | 80512..80910 | - | 399 | WP_011977783 | hypothetical protein | - |
| NB672_RS28605 (NB672_28605) | 80918..81307 | - | 390 | WP_004153076 | hypothetical protein | - |
| NB672_RS28610 (NB672_28610) | 81350..81754 | - | 405 | WP_004152503 | hypothetical protein | - |
| NB672_RS28615 (NB672_28615) | 81821..82132 | - | 312 | WP_004152502 | hypothetical protein | - |
| NB672_RS28620 (NB672_28620) | 82133..82351 | - | 219 | WP_004152501 | hypothetical protein | - |
| NB672_RS28625 (NB672_28625) | 82457..82867 | - | 411 | WP_004152499 | hypothetical protein | - |
| NB672_RS28630 (NB672_28630) | 82999..83583 | - | 585 | WP_004161368 | type IV conjugative transfer system lipoprotein TraV | traV |
| NB672_RS28635 (NB672_28635) | 83697..85121 | - | 1425 | WP_004155033 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NB672_RS28640 (NB672_28640) | 85121..85861 | - | 741 | WP_004152497 | type-F conjugative transfer system secretin TraK | traK |
| NB672_RS28645 (NB672_28645) | 85848..86414 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| NB672_RS28650 (NB672_28650) | 86434..86739 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| NB672_RS28655 (NB672_28655) | 86753..87121 | - | 369 | WP_004152496 | type IV conjugative transfer system pilin TraA | - |
| NB672_RS28660 (NB672_28660) | 87175..87561 | - | 387 | WP_004152495 | TraY domain-containing protein | - |
| NB672_RS28665 (NB672_28665) | 87640..88326 | - | 687 | WP_004152494 | transcriptional regulator TraJ family protein | - |
| NB672_RS28670 (NB672_28670) | 88500..88898 | - | 399 | WP_004152493 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NB672_RS28675 (NB672_28675) | 89320..89805 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| NB672_RS28680 (NB672_28680) | 89838..90167 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| NB672_RS28685 (NB672_28685) | 90200..91021 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| NB672_RS28690 (NB672_28690) | 91841..92674 | - | 834 | WP_004152751 | N-6 DNA methylase | - |
| NB672_RS28695 (NB672_28695) | 92725..92871 | - | 147 | WP_004152750 | hypothetical protein | - |
| NB672_RS28700 (NB672_28700) | 92966..93313 | - | 348 | WP_004152749 | hypothetical protein | - |
| NB672_RS28705 (NB672_28705) | 93370..93723 | - | 354 | WP_004152748 | hypothetical protein | - |
| NB672_RS28710 (NB672_28710) | 94353..94703 | - | 351 | WP_004153414 | hypothetical protein | - |