T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2589..26469
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY50_RS28280 (NBY50_28265) | 430..828 | + | 399 | WP_064174027 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NBY50_RS28285 (NBY50_28270) | 1002..1688 | + | 687 | WP_064174026 | transcriptional regulator TraJ family protein | - |
| NBY50_RS28290 (NBY50_28275) | 1767..2153 | + | 387 | WP_064174025 | TraY domain-containing protein | - |
| NBY50_RS28295 (NBY50_28280) | 2207..2575 | + | 369 | WP_020316649 | type IV conjugative transfer system pilin TraA | - |
| NBY50_RS28300 (NBY50_28285) | 2589..2894 | + | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| NBY50_RS28305 (NBY50_28290) | 2914..3480 | + | 567 | WP_020316627 | type IV conjugative transfer system protein TraE | traE |
| NBY50_RS28310 (NBY50_28295) | 3467..4207 | + | 741 | WP_064174024 | type-F conjugative transfer system secretin TraK | traK |
| NBY50_RS28315 (NBY50_28300) | 4207..5631 | + | 1425 | WP_042946342 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NBY50_RS28320 (NBY50_28305) | 5624..6220 | + | 597 | WP_023340943 | conjugal transfer pilus-stabilizing protein TraP | - |
| NBY50_RS28325 (NBY50_28310) | 6243..6812 | + | 570 | WP_023316399 | type IV conjugative transfer system lipoprotein TraV | traV |
| NBY50_RS28330 (NBY50_28315) | 6944..7354 | + | 411 | WP_023316400 | hypothetical protein | - |
| NBY50_RS28335 (NBY50_28320) | 7359..7643 | + | 285 | WP_023316401 | hypothetical protein | - |
| NBY50_RS28340 (NBY50_28325) | 7667..7885 | + | 219 | WP_023316402 | hypothetical protein | - |
| NBY50_RS28345 (NBY50_28330) | 7886..8197 | + | 312 | WP_023316403 | hypothetical protein | - |
| NBY50_RS28350 (NBY50_28335) | 8264..8668 | + | 405 | WP_023316404 | hypothetical protein | - |
| NBY50_RS28355 (NBY50_28340) | 8665..8955 | + | 291 | WP_020323516 | hypothetical protein | - |
| NBY50_RS28360 (NBY50_28345) | 8963..9361 | + | 399 | WP_072156904 | hypothetical protein | - |
| NBY50_RS28365 (NBY50_28350) | 9433..12072 | + | 2640 | WP_020323518 | type IV secretion system protein TraC | virb4 |
| NBY50_RS28370 (NBY50_28355) | 12072..12461 | + | 390 | WP_020314627 | type-F conjugative transfer system protein TrbI | - |
| NBY50_RS28375 (NBY50_28360) | 12461..13087 | + | 627 | WP_020314628 | type-F conjugative transfer system protein TraW | traW |
| NBY50_RS28380 (NBY50_28365) | 13131..14090 | + | 960 | WP_029497356 | conjugal transfer pilus assembly protein TraU | traU |
| NBY50_RS28385 (NBY50_28370) | 14103..14741 | + | 639 | WP_020321224 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NBY50_RS28390 (NBY50_28375) | 14800..16755 | + | 1956 | WP_020803160 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NBY50_RS28395 (NBY50_28380) | 16788..17069 | + | 282 | WP_022644736 | hypothetical protein | - |
| NBY50_RS28400 (NBY50_28385) | 17059..17286 | + | 228 | WP_012540032 | conjugal transfer protein TrbE | - |
| NBY50_RS28405 (NBY50_28390) | 17297..17623 | + | 327 | WP_020323521 | hypothetical protein | - |
| NBY50_RS28410 (NBY50_28395) | 17644..18396 | + | 753 | WP_064174011 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NBY50_RS28415 (NBY50_28400) | 18407..18646 | + | 240 | WP_020315123 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NBY50_RS28420 (NBY50_28405) | 18618..19193 | + | 576 | WP_020315129 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NBY50_RS28425 (NBY50_28410) | 19180..20550 | + | 1371 | WP_020315127 | conjugal transfer pilus assembly protein TraH | traH |
| NBY50_RS28430 (NBY50_28415) | 20550..23399 | + | 2850 | WP_064174012 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NBY50_RS28435 (NBY50_28420) | 23405..23932 | + | 528 | WP_020315130 | hypothetical protein | - |
| NBY50_RS28440 (NBY50_28425) | 24169..26469 | + | 2301 | WP_064174013 | type IV conjugative transfer system coupling protein TraD | virb4 |