T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 126730..156757
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY50_RS27880 (NBY50_27865) | 126730..129042 | - | 2313 | WP_015065541 | type IV conjugative transfer system coupling protein TraD | virb4 |
| NBY50_RS27885 (NBY50_27870) | 129171..129860 | - | 690 | WP_072198073 | hypothetical protein | - |
| NBY50_RS27890 (NBY50_27875) | 130053..130784 | - | 732 | WP_016831056 | conjugal transfer complement resistance protein TraT | - |
| NBY50_RS27895 (NBY50_27880) | 131035..131637 | - | 603 | WP_071604857 | hypothetical protein | - |
| NBY50_RS27900 (NBY50_27885) | 131660..134482 | - | 2823 | WP_016831055 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NBY50_RS27905 (NBY50_27890) | 134482..135861 | - | 1380 | WP_072159542 | conjugal transfer pilus assembly protein TraH | traH |
| NBY50_RS27910 (NBY50_27895) | 135839..136282 | - | 444 | WP_016831053 | F-type conjugal transfer protein TrbF | - |
| NBY50_RS27915 (NBY50_27900) | 136328..136885 | - | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NBY50_RS27920 (NBY50_27905) | 136857..137096 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NBY50_RS27925 (NBY50_27910) | 137107..137859 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NBY50_RS27930 (NBY50_27915) | 137880..138206 | - | 327 | WP_016831051 | hypothetical protein | - |
| NBY50_RS27935 (NBY50_27920) | 138219..138467 | - | 249 | WP_004152675 | hypothetical protein | - |
| NBY50_RS27940 (NBY50_27925) | 138445..138699 | - | 255 | WP_015065558 | conjugal transfer protein TrbE | - |
| NBY50_RS27945 (NBY50_27930) | 138731..140686 | - | 1956 | WP_023313940 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NBY50_RS27950 (NBY50_27935) | 140745..141392 | - | 648 | WP_039109927 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NBY50_RS27955 (NBY50_27940) | 141471..141647 | - | 177 | WP_162866177 | hypothetical protein | - |
| NBY50_RS27960 (NBY50_27945) | 141668..142657 | - | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| NBY50_RS27965 (NBY50_27950) | 142654..143055 | - | 402 | WP_016831047 | hypothetical protein | - |
| NBY50_RS27970 (NBY50_27955) | 143090..143725 | - | 636 | WP_016831046 | type-F conjugative transfer system protein TraW | traW |
| NBY50_RS27975 (NBY50_27960) | 143725..144114 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| NBY50_RS27980 (NBY50_27965) | 144114..146753 | - | 2640 | WP_016831045 | type IV secretion system protein TraC | virb4 |
| NBY50_RS27985 (NBY50_27970) | 146825..147223 | - | 399 | WP_023158008 | hypothetical protein | - |
| NBY50_RS27990 (NBY50_27975) | 147231..147449 | - | 219 | WP_072196435 | hypothetical protein | - |
| NBY50_RS27995 (NBY50_27980) | 147463..147621 | - | 159 | WP_223178560 | hypothetical protein | - |
| NBY50_RS28000 (NBY50_27985) | 147664..148068 | - | 405 | WP_016831042 | hypothetical protein | - |
| NBY50_RS28005 (NBY50_27990) | 148135..148446 | - | 312 | WP_016831041 | hypothetical protein | - |
| NBY50_RS28010 (NBY50_27995) | 148447..148665 | - | 219 | WP_014386199 | hypothetical protein | - |
| NBY50_RS28015 (NBY50_28000) | 148689..148978 | - | 290 | Protein_165 | hypothetical protein | - |
| NBY50_RS28020 (NBY50_28005) | 148983..149393 | - | 411 | WP_032409654 | hypothetical protein | - |
| NBY50_RS28025 (NBY50_28010) | 149525..150109 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| NBY50_RS28030 (NBY50_28015) | 150132..150728 | - | 597 | Protein_168 | conjugal transfer pilus-stabilizing protein TraP | - |
| NBY50_RS28035 (NBY50_28020) | 150721..152145 | - | 1425 | WP_016831036 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NBY50_RS28040 (NBY50_28025) | 152145..152885 | - | 741 | WP_032408905 | type-F conjugative transfer system secretin TraK | traK |
| NBY50_RS28045 (NBY50_28030) | 152872..153438 | - | 567 | WP_016831035 | type IV conjugative transfer system protein TraE | traE |
| NBY50_RS28050 (NBY50_28035) | 153458..153763 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| NBY50_RS28055 (NBY50_28040) | 153777..154145 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| NBY50_RS28060 (NBY50_28045) | 154207..154413 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| NBY50_RS28065 (NBY50_28050) | 154546..155265 | - | 720 | WP_016831034 | conjugal transfer protein TrbJ | - |
| NBY50_RS28070 (NBY50_28055) | 155465..155881 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NBY50_RS28075 (NBY50_28060) | 156272..156757 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| NBY50_RS28080 (NBY50_28065) | 156790..157119 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| NBY50_RS28085 (NBY50_28070) | 157152..157973 | - | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| NBY50_RS28090 (NBY50_28075) | 158806..159219 | - | 414 | WP_004182074 | helix-turn-helix domain-containing protein | - |
| NBY50_RS28095 (NBY50_28080) | 159220..159498 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| NBY50_RS28100 (NBY50_28085) | 159488..159808 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NBY50_RS28105 (NBY50_28090) | 159889..160113 | - | 225 | WP_004152719 | hypothetical protein | - |
| NBY50_RS28110 (NBY50_28095) | 160124..160336 | - | 213 | WP_004182070 | hypothetical protein | - |
| NBY50_RS28115 (NBY50_28100) | 160397..160753 | - | 357 | WP_004152717 | hypothetical protein | - |
| NBY50_RS28120 (NBY50_28105) | 161389..161739 | - | 351 | WP_004182068 | hypothetical protein | - |