T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 22185..51397
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY29_RS25510 (NBY29_25505) | 17574..17801 | + | 228 | WP_004182050 | hypothetical protein | - |
| NBY29_RS25515 (NBY29_25510) | 17893..18123 | + | 231 | WP_001568051 | hypothetical protein | - |
| NBY29_RS25520 (NBY29_25515) | 18175..19530 | + | 1356 | WP_004182052 | DUF3560 domain-containing protein | - |
| NBY29_RS25525 (NBY29_25520) | 19578..20141 | + | 564 | WP_004182054 | methyltransferase | - |
| NBY29_RS25530 (NBY29_25525) | 20969..21790 | + | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| NBY29_RS25535 (NBY29_25530) | 21823..22152 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| NBY29_RS25540 (NBY29_25535) | 22185..22670 | - | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| NBY29_RS25545 (NBY29_25540) | 23061..23477 | + | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NBY29_RS25550 (NBY29_25545) | 23677..24396 | + | 720 | WP_016831034 | conjugal transfer protein TrbJ | - |
| NBY29_RS25555 (NBY29_25550) | 24529..24735 | + | 207 | WP_171773970 | TraY domain-containing protein | - |
| NBY29_RS25560 (NBY29_25555) | 24797..25165 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| NBY29_RS25565 (NBY29_25560) | 25179..25484 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| NBY29_RS25570 (NBY29_25565) | 25504..26070 | + | 567 | WP_016831035 | type IV conjugative transfer system protein TraE | traE |
| NBY29_RS25575 (NBY29_25570) | 26057..26797 | + | 741 | WP_047670045 | type-F conjugative transfer system secretin TraK | traK |
| NBY29_RS25580 (NBY29_25575) | 26797..28221 | + | 1425 | WP_015632498 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NBY29_RS25585 (NBY29_25580) | 28214..28810 | + | 597 | WP_047670043 | conjugal transfer pilus-stabilizing protein TraP | - |
| NBY29_RS25590 (NBY29_25585) | 28833..29417 | + | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| NBY29_RS25595 (NBY29_25590) | 29549..29959 | + | 411 | WP_015632501 | hypothetical protein | - |
| NBY29_RS25600 (NBY29_25595) | 29964..30233 | + | 270 | WP_032433956 | hypothetical protein | - |
| NBY29_RS25605 (NBY29_25600) | 30272..30490 | + | 219 | WP_004171484 | hypothetical protein | - |
| NBY29_RS25610 (NBY29_25605) | 30491..30802 | + | 312 | WP_015632502 | hypothetical protein | - |
| NBY29_RS25615 (NBY29_25610) | 30869..31273 | + | 405 | WP_032433941 | hypothetical protein | - |
| NBY29_RS25620 (NBY29_25615) | 31316..31705 | + | 390 | WP_015632504 | hypothetical protein | - |
| NBY29_RS25625 (NBY29_25620) | 31713..32111 | + | 399 | WP_015632505 | hypothetical protein | - |
| NBY29_RS25630 (NBY29_25625) | 32183..34822 | + | 2640 | WP_015632506 | type IV secretion system protein TraC | virb4 |
| NBY29_RS25635 (NBY29_25630) | 34822..35211 | + | 390 | WP_015632507 | type-F conjugative transfer system protein TrbI | - |
| NBY29_RS25640 (NBY29_25635) | 35211..35846 | + | 636 | WP_047670041 | type-F conjugative transfer system protein TraW | traW |
| NBY29_RS25645 (NBY29_25640) | 35881..36282 | + | 402 | WP_004194979 | hypothetical protein | - |
| NBY29_RS25650 (NBY29_25645) | 36279..37268 | + | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| NBY29_RS25655 (NBY29_25650) | 37544..38191 | + | 648 | WP_015632510 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NBY29_RS25660 (NBY29_25655) | 38250..40205 | + | 1956 | WP_015065533 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NBY29_RS25665 (NBY29_25660) | 40237..40491 | + | 255 | WP_032433943 | conjugal transfer protein TrbE | - |
| NBY29_RS25670 (NBY29_25665) | 40469..40717 | + | 249 | WP_004152675 | hypothetical protein | - |
| NBY29_RS25675 (NBY29_25670) | 40730..41056 | + | 327 | WP_015632512 | hypothetical protein | - |
| NBY29_RS25680 (NBY29_25675) | 41077..41829 | + | 753 | WP_015632513 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NBY29_RS25685 (NBY29_25680) | 41840..42079 | + | 240 | WP_048255490 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NBY29_RS25690 (NBY29_25685) | 42051..42608 | + | 558 | WP_023158002 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NBY29_RS25695 (NBY29_25690) | 42654..43097 | + | 444 | WP_023158001 | F-type conjugal transfer protein TrbF | - |
| NBY29_RS25700 (NBY29_25695) | 43075..44454 | + | 1380 | WP_023158000 | conjugal transfer pilus assembly protein TraH | traH |
| NBY29_RS25705 (NBY29_25700) | 44454..47303 | + | 2850 | WP_023329044 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NBY29_RS25710 (NBY29_25705) | 47309..47836 | + | 528 | WP_029498351 | conjugal transfer protein TraS | - |
| NBY29_RS25715 (NBY29_25710) | 48026..48757 | + | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| NBY29_RS25720 (NBY29_25715) | 49115..51397 | + | 2283 | WP_048255491 | type IV conjugative transfer system coupling protein TraD | virb4 |