T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3107..26987
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY52_RS28265 (NBY52_28255) | 3107..5407 | - | 2301 | WP_064174013 | type IV conjugative transfer system coupling protein TraD | virb4 |
| NBY52_RS28270 (NBY52_28260) | 5644..6171 | - | 528 | WP_020315130 | hypothetical protein | - |
| NBY52_RS28275 (NBY52_28265) | 6177..9026 | - | 2850 | WP_064174012 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NBY52_RS28280 (NBY52_28270) | 9026..10396 | - | 1371 | WP_020315127 | conjugal transfer pilus assembly protein TraH | traH |
| NBY52_RS28285 (NBY52_28275) | 10383..10958 | - | 576 | WP_020315129 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NBY52_RS28290 (NBY52_28280) | 10930..11169 | - | 240 | WP_020315123 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NBY52_RS28295 (NBY52_28285) | 11180..11932 | - | 753 | WP_064174011 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NBY52_RS28300 (NBY52_28290) | 11953..12279 | - | 327 | WP_020323521 | hypothetical protein | - |
| NBY52_RS28305 (NBY52_28295) | 12290..12517 | - | 228 | WP_012540032 | conjugal transfer protein TrbE | - |
| NBY52_RS28310 (NBY52_28300) | 12507..12788 | - | 282 | WP_022644736 | hypothetical protein | - |
| NBY52_RS28315 (NBY52_28305) | 12821..14776 | - | 1956 | WP_020803160 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NBY52_RS28320 (NBY52_28310) | 14835..15473 | - | 639 | WP_020321224 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NBY52_RS28325 (NBY52_28315) | 15486..16445 | - | 960 | WP_029497356 | conjugal transfer pilus assembly protein TraU | traU |
| NBY52_RS28330 (NBY52_28320) | 16489..17115 | - | 627 | WP_020314628 | type-F conjugative transfer system protein TraW | traW |
| NBY52_RS28335 (NBY52_28325) | 17115..17504 | - | 390 | WP_020314627 | type-F conjugative transfer system protein TrbI | - |
| NBY52_RS28340 (NBY52_28330) | 17504..20143 | - | 2640 | WP_020323518 | type IV secretion system protein TraC | virb4 |
| NBY52_RS28345 (NBY52_28335) | 20215..20613 | - | 399 | WP_072156904 | hypothetical protein | - |
| NBY52_RS28350 (NBY52_28340) | 20621..20911 | - | 291 | WP_020323516 | hypothetical protein | - |
| NBY52_RS28355 (NBY52_28345) | 20908..21312 | - | 405 | WP_023316404 | hypothetical protein | - |
| NBY52_RS28360 (NBY52_28350) | 21379..21690 | - | 312 | WP_023316403 | hypothetical protein | - |
| NBY52_RS28365 (NBY52_28355) | 21691..21909 | - | 219 | WP_023316402 | hypothetical protein | - |
| NBY52_RS28370 (NBY52_28360) | 21933..22217 | - | 285 | WP_023316401 | hypothetical protein | - |
| NBY52_RS28375 (NBY52_28365) | 22222..22632 | - | 411 | WP_023316400 | hypothetical protein | - |
| NBY52_RS28380 (NBY52_28370) | 22764..23333 | - | 570 | WP_023316399 | type IV conjugative transfer system lipoprotein TraV | traV |
| NBY52_RS28385 (NBY52_28375) | 23356..23952 | - | 597 | WP_023340943 | conjugal transfer pilus-stabilizing protein TraP | - |
| NBY52_RS28390 (NBY52_28380) | 23945..25369 | - | 1425 | WP_042946342 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NBY52_RS28395 (NBY52_28385) | 25369..26109 | - | 741 | WP_064174024 | type-F conjugative transfer system secretin TraK | traK |
| NBY52_RS28400 (NBY52_28390) | 26096..26662 | - | 567 | WP_020316627 | type IV conjugative transfer system protein TraE | traE |
| NBY52_RS28405 (NBY52_28395) | 26682..26987 | - | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| NBY52_RS28410 (NBY52_28400) | 27001..27369 | - | 369 | WP_020316649 | type IV conjugative transfer system pilin TraA | - |
| NBY52_RS28415 (NBY52_28405) | 27423..27809 | - | 387 | WP_064174025 | TraY domain-containing protein | - |
| NBY52_RS28420 (NBY52_28410) | 27888..28574 | - | 687 | WP_064174026 | transcriptional regulator TraJ family protein | - |
| NBY52_RS28425 (NBY52_28415) | 28748..29146 | - | 399 | WP_064174027 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NBY52_RS28430 (NBY52_28420) | 29640..30062 | + | 423 | WP_020315406 | transglycosylase SLT domain-containing protein | - |
| NBY52_RS28435 (NBY52_28425) | 30085..30627 | - | 543 | WP_020804853 | antirestriction protein | - |