T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 126729..156756
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY52_RS27860 (NBY52_27850) | 126729..129041 | - | 2313 | WP_015065541 | type IV conjugative transfer system coupling protein TraD | virb4 |
| NBY52_RS27865 (NBY52_27855) | 129170..129859 | - | 690 | WP_072198073 | hypothetical protein | - |
| NBY52_RS27870 (NBY52_27860) | 130052..130783 | - | 732 | WP_016831056 | conjugal transfer complement resistance protein TraT | - |
| NBY52_RS27875 (NBY52_27865) | 131034..131636 | - | 603 | WP_071604857 | hypothetical protein | - |
| NBY52_RS27880 (NBY52_27870) | 131659..134481 | - | 2823 | WP_016831055 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NBY52_RS27885 (NBY52_27875) | 134481..135860 | - | 1380 | WP_072159542 | conjugal transfer pilus assembly protein TraH | traH |
| NBY52_RS27890 (NBY52_27880) | 135838..136281 | - | 444 | WP_016831053 | F-type conjugal transfer protein TrbF | - |
| NBY52_RS27895 (NBY52_27885) | 136327..136884 | - | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NBY52_RS27900 (NBY52_27890) | 136856..137095 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NBY52_RS27905 (NBY52_27895) | 137106..137858 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NBY52_RS27910 (NBY52_27900) | 137879..138205 | - | 327 | WP_016831051 | hypothetical protein | - |
| NBY52_RS27915 (NBY52_27905) | 138218..138466 | - | 249 | WP_004152675 | hypothetical protein | - |
| NBY52_RS27920 (NBY52_27910) | 138444..138698 | - | 255 | WP_015065558 | conjugal transfer protein TrbE | - |
| NBY52_RS27925 (NBY52_27915) | 138730..140685 | - | 1956 | WP_023313940 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NBY52_RS27930 (NBY52_27920) | 140744..141391 | - | 648 | WP_039109927 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NBY52_RS27935 (NBY52_27925) | 141470..141646 | - | 177 | WP_162866177 | hypothetical protein | - |
| NBY52_RS27940 (NBY52_27930) | 141667..142656 | - | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| NBY52_RS27945 (NBY52_27935) | 142653..143054 | - | 402 | WP_016831047 | hypothetical protein | - |
| NBY52_RS27950 (NBY52_27940) | 143089..143724 | - | 636 | WP_016831046 | type-F conjugative transfer system protein TraW | traW |
| NBY52_RS27955 (NBY52_27945) | 143724..144113 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| NBY52_RS27960 (NBY52_27950) | 144113..146752 | - | 2640 | WP_016831045 | type IV secretion system protein TraC | virb4 |
| NBY52_RS27965 (NBY52_27955) | 146824..147222 | - | 399 | WP_023158008 | hypothetical protein | - |
| NBY52_RS27970 (NBY52_27960) | 147230..147448 | - | 219 | WP_072196435 | hypothetical protein | - |
| NBY52_RS27975 (NBY52_27965) | 147462..147620 | - | 159 | WP_223178560 | hypothetical protein | - |
| NBY52_RS27980 (NBY52_27970) | 147663..148067 | - | 405 | WP_016831042 | hypothetical protein | - |
| NBY52_RS27985 (NBY52_27975) | 148134..148445 | - | 312 | WP_016831041 | hypothetical protein | - |
| NBY52_RS27990 (NBY52_27980) | 148446..148664 | - | 219 | WP_014386199 | hypothetical protein | - |
| NBY52_RS27995 (NBY52_27985) | 148688..148977 | - | 290 | Protein_165 | hypothetical protein | - |
| NBY52_RS28000 (NBY52_27990) | 148982..149392 | - | 411 | WP_032409654 | hypothetical protein | - |
| NBY52_RS28005 (NBY52_27995) | 149524..150108 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| NBY52_RS28010 (NBY52_28000) | 150131..150727 | - | 597 | Protein_168 | conjugal transfer pilus-stabilizing protein TraP | - |
| NBY52_RS28015 (NBY52_28005) | 150720..152144 | - | 1425 | WP_016831036 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NBY52_RS28020 (NBY52_28010) | 152144..152884 | - | 741 | WP_032408905 | type-F conjugative transfer system secretin TraK | traK |
| NBY52_RS28025 (NBY52_28015) | 152871..153437 | - | 567 | WP_016831035 | type IV conjugative transfer system protein TraE | traE |
| NBY52_RS28030 (NBY52_28020) | 153457..153762 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| NBY52_RS28035 (NBY52_28025) | 153776..154144 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| NBY52_RS28040 (NBY52_28030) | 154206..154412 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| NBY52_RS28045 (NBY52_28035) | 154545..155264 | - | 720 | WP_016831034 | conjugal transfer protein TrbJ | - |
| NBY52_RS28050 (NBY52_28040) | 155464..155880 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NBY52_RS28055 (NBY52_28045) | 156271..156756 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| NBY52_RS28060 (NBY52_28050) | 156789..157118 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| NBY52_RS28065 (NBY52_28055) | 157151..157972 | - | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| NBY52_RS28070 (NBY52_28060) | 158805..159218 | - | 414 | WP_004182074 | helix-turn-helix domain-containing protein | - |
| NBY52_RS28075 (NBY52_28065) | 159219..159497 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| NBY52_RS28080 (NBY52_28070) | 159487..159807 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NBY52_RS28085 (NBY52_28075) | 159888..160112 | - | 225 | WP_004152719 | hypothetical protein | - |
| NBY52_RS28090 (NBY52_28080) | 160123..160335 | - | 213 | WP_004182070 | hypothetical protein | - |
| NBY52_RS28095 (NBY52_28085) | 160396..160752 | - | 357 | WP_004152717 | hypothetical protein | - |
| NBY52_RS28100 (NBY52_28090) | 161388..161738 | - | 351 | WP_004182068 | hypothetical protein | - |