T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 88835..115557
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NB666_RS27455 (NB666_27455) | 88835..91147 | - | 2313 | WP_032072078 | type IV conjugative transfer system coupling protein TraD | virb4 |
| NB666_RS27460 (NB666_27460) | 91276..91965 | - | 690 | WP_022644928 | hypothetical protein | - |
| NB666_RS27465 (NB666_27465) | 92157..92888 | - | 732 | WP_004152622 | conjugal transfer complement resistance protein TraT | - |
| NB666_RS27470 (NB666_27470) | 93072..93620 | - | 549 | WP_004152623 | conjugal transfer entry exclusion protein TraS | - |
| NB666_RS27475 (NB666_27475) | 93633..94238 | - | 606 | WP_019405095 | hypothetical protein | traG |
| NB666_RS27480 (NB666_27480) | 94317..95014 | + | 698 | WP_095033700 | IS1-like element IS1B family transposase | - |
| NB666_RS27485 (NB666_27485) | 95031..97259 | - | 2229 | Protein_113 | conjugal transfer mating-pair stabilization protein TraG | - |
| NB666_RS27490 (NB666_27490) | 97259..98638 | - | 1380 | WP_073546760 | conjugal transfer pilus assembly protein TraH | traH |
| NB666_RS27495 (NB666_27495) | 98616..99059 | - | 444 | WP_004194305 | F-type conjugal transfer protein TrbF | - |
| NB666_RS27500 (NB666_27500) | 99105..99662 | - | 558 | WP_022644930 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NB666_RS27505 (NB666_27505) | 99634..99873 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NB666_RS27510 (NB666_27510) | 99884..100636 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NB666_RS27515 (NB666_27515) | 100657..100983 | - | 327 | WP_004152676 | hypothetical protein | - |
| NB666_RS27520 (NB666_27520) | 100996..101244 | - | 249 | WP_022644931 | hypothetical protein | - |
| NB666_RS27525 (NB666_27525) | 101222..101476 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| NB666_RS27530 (NB666_27530) | 101508..103463 | - | 1956 | WP_022644932 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NB666_RS27535 (NB666_27535) | 103522..104160 | - | 639 | WP_022644933 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NB666_RS27540 (NB666_27540) | 104173..105162 | - | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| NB666_RS27545 (NB666_27545) | 105159..105560 | - | 402 | WP_022644934 | hypothetical protein | - |
| NB666_RS27550 (NB666_27550) | 105595..106230 | - | 636 | WP_020325113 | type-F conjugative transfer system protein TraW | traW |
| NB666_RS27555 (NB666_27555) | 106227..106619 | - | 393 | WP_022644935 | type-F conjugative transfer system protein TrbI | - |
| NB666_RS27560 (NB666_27560) | 106619..109258 | - | 2640 | WP_022644936 | type IV secretion system protein TraC | virb4 |
| NB666_RS27565 (NB666_27565) | 109330..109728 | - | 399 | WP_011977783 | hypothetical protein | - |
| NB666_RS27570 (NB666_27570) | 109736..110125 | - | 390 | WP_004153076 | hypothetical protein | - |
| NB666_RS27575 (NB666_27575) | 110168..110572 | - | 405 | WP_004152503 | hypothetical protein | - |
| NB666_RS27580 (NB666_27580) | 110639..110950 | - | 312 | WP_004152502 | hypothetical protein | - |
| NB666_RS27585 (NB666_27585) | 110951..111169 | - | 219 | WP_004152501 | hypothetical protein | - |
| NB666_RS27590 (NB666_27590) | 111275..111685 | - | 411 | WP_004152499 | hypothetical protein | - |
| NB666_RS27595 (NB666_27595) | 111817..112401 | - | 585 | WP_004161368 | type IV conjugative transfer system lipoprotein TraV | traV |
| NB666_RS27600 (NB666_27600) | 112515..113939 | - | 1425 | WP_022644937 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NB666_RS27605 (NB666_27605) | 113939..114679 | - | 741 | WP_004152497 | type-F conjugative transfer system secretin TraK | traK |
| NB666_RS27610 (NB666_27610) | 114666..115232 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| NB666_RS27615 (NB666_27615) | 115252..115557 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| NB666_RS27620 (NB666_27620) | 115571..115939 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| NB666_RS27970 | 116008..116208 | - | 201 | WP_032072063 | TraY domain-containing protein | - |
| NB666_RS27625 (NB666_27625) | 116293..116994 | - | 702 | WP_022644938 | hypothetical protein | - |
| NB666_RS27630 (NB666_27630) | 117229..117621 | - | 393 | WP_022644939 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NB666_RS27635 (NB666_27635) | 118127..118549 | + | 423 | WP_072205880 | transglycosylase SLT domain-containing protein | - |
| NB666_RS27640 (NB666_27640) | 118573..119115 | - | 543 | WP_169319783 | antirestriction protein | - |
| NB666_RS27645 (NB666_27645) | 119464..119700 | - | 237 | Protein_146 | SAM-dependent DNA methyltransferase | - |
| NB666_RS27650 (NB666_27650) | 119748..119894 | - | 147 | WP_022644943 | hypothetical protein | - |
| NB666_RS27655 (NB666_27655) | 119987..120334 | - | 348 | WP_022644944 | hypothetical protein | - |