T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 114515..144541
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY56_RS27740 (NBY56_27740) | 109533..109883 | + | 351 | WP_004182068 | hypothetical protein | - |
| NBY56_RS27745 (NBY56_27745) | 110519..110875 | + | 357 | WP_004152717 | hypothetical protein | - |
| NBY56_RS27750 (NBY56_27750) | 110936..111148 | + | 213 | WP_004182070 | hypothetical protein | - |
| NBY56_RS27755 (NBY56_27755) | 111159..111383 | + | 225 | WP_004152719 | hypothetical protein | - |
| NBY56_RS27760 (NBY56_27760) | 111464..111784 | + | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NBY56_RS27765 (NBY56_27765) | 111774..112052 | + | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| NBY56_RS27770 (NBY56_27770) | 112053..112466 | + | 414 | WP_004182074 | helix-turn-helix domain-containing protein | - |
| NBY56_RS27775 (NBY56_27775) | 113299..114120 | + | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| NBY56_RS27780 (NBY56_27780) | 114153..114482 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| NBY56_RS27785 (NBY56_27785) | 114515..115000 | - | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| NBY56_RS27790 (NBY56_27790) | 115391..115807 | + | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NBY56_RS27795 (NBY56_27795) | 116007..116726 | + | 720 | WP_016831034 | conjugal transfer protein TrbJ | - |
| NBY56_RS27800 (NBY56_27800) | 116859..117065 | + | 207 | WP_171773970 | TraY domain-containing protein | - |
| NBY56_RS27805 (NBY56_27805) | 117127..117495 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| NBY56_RS27810 (NBY56_27810) | 117509..117814 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| NBY56_RS27815 (NBY56_27815) | 117834..118400 | + | 567 | WP_016831035 | type IV conjugative transfer system protein TraE | traE |
| NBY56_RS27820 (NBY56_27820) | 118387..119127 | + | 741 | WP_032408905 | type-F conjugative transfer system secretin TraK | traK |
| NBY56_RS27825 (NBY56_27825) | 119127..120551 | + | 1425 | WP_016831036 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NBY56_RS27830 (NBY56_27830) | 120544..121140 | + | 597 | Protein_131 | conjugal transfer pilus-stabilizing protein TraP | - |
| NBY56_RS27835 (NBY56_27835) | 121163..121747 | + | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| NBY56_RS27840 (NBY56_27840) | 121879..122289 | + | 411 | WP_032409654 | hypothetical protein | - |
| NBY56_RS27845 (NBY56_27845) | 122294..122583 | + | 290 | Protein_134 | hypothetical protein | - |
| NBY56_RS27850 (NBY56_27850) | 122607..122825 | + | 219 | WP_014386199 | hypothetical protein | - |
| NBY56_RS27855 (NBY56_27855) | 122826..123137 | + | 312 | WP_016831041 | hypothetical protein | - |
| NBY56_RS27860 (NBY56_27860) | 123204..123608 | + | 405 | WP_016831042 | hypothetical protein | - |
| NBY56_RS27865 (NBY56_27865) | 123651..123809 | + | 159 | WP_223178560 | hypothetical protein | - |
| NBY56_RS27870 (NBY56_27870) | 123823..124041 | + | 219 | WP_072196435 | hypothetical protein | - |
| NBY56_RS27875 (NBY56_27875) | 124049..124447 | + | 399 | WP_023158008 | hypothetical protein | - |
| NBY56_RS27880 (NBY56_27880) | 124519..127158 | + | 2640 | WP_016831045 | type IV secretion system protein TraC | virb4 |
| NBY56_RS27885 (NBY56_27885) | 127158..127547 | + | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| NBY56_RS27890 (NBY56_27890) | 127547..128182 | + | 636 | WP_016831046 | type-F conjugative transfer system protein TraW | traW |
| NBY56_RS27895 (NBY56_27895) | 128217..128618 | + | 402 | WP_016831047 | hypothetical protein | - |
| NBY56_RS27900 (NBY56_27900) | 128615..129604 | + | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| NBY56_RS27905 (NBY56_27905) | 129625..129801 | + | 177 | WP_162866177 | hypothetical protein | - |
| NBY56_RS27910 (NBY56_27910) | 129880..130527 | + | 648 | WP_039109927 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NBY56_RS27915 (NBY56_27915) | 130586..132540 | + | 1955 | Protein_148 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NBY56_RS27920 (NBY56_27920) | 132572..132826 | + | 255 | WP_015065558 | conjugal transfer protein TrbE | - |
| NBY56_RS27925 (NBY56_27925) | 132804..133052 | + | 249 | WP_004152675 | hypothetical protein | - |
| NBY56_RS27930 (NBY56_27930) | 133065..133391 | + | 327 | WP_016831051 | hypothetical protein | - |
| NBY56_RS27935 (NBY56_27935) | 133412..134164 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NBY56_RS27940 (NBY56_27940) | 134175..134414 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NBY56_RS27945 (NBY56_27945) | 134386..134943 | + | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NBY56_RS27950 (NBY56_27950) | 134989..135432 | + | 444 | WP_016831053 | F-type conjugal transfer protein TrbF | - |
| NBY56_RS27955 (NBY56_27955) | 135410..136789 | + | 1380 | WP_072159542 | conjugal transfer pilus assembly protein TraH | traH |
| NBY56_RS27960 (NBY56_27960) | 136789..139611 | + | 2823 | WP_016831055 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NBY56_RS27965 (NBY56_27965) | 139634..140236 | + | 603 | WP_071604857 | hypothetical protein | - |
| NBY56_RS27970 (NBY56_27970) | 140487..141218 | + | 732 | WP_016831056 | conjugal transfer complement resistance protein TraT | - |
| NBY56_RS27975 (NBY56_27975) | 141411..142100 | + | 690 | WP_072198073 | hypothetical protein | - |
| NBY56_RS27980 (NBY56_27980) | 142229..144541 | + | 2313 | WP_015065541 | type IV conjugative transfer system coupling protein TraD | virb4 |