T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 109926..138344
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NB668_RS28650 (NB668_28645) | 109926..112235 | - | 2310 | WP_004152630 | type IV conjugative transfer system coupling protein TraD | virb4 |
| NB668_RS28655 (NB668_28650) | 112595..113326 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| NB668_RS28660 (NB668_28655) | 113516..114043 | - | 528 | WP_004153030 | hypothetical protein | - |
| NB668_RS28665 (NB668_28660) | 114049..116898 | - | 2850 | WP_250825006 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NB668_RS28670 (NB668_28665) | 116898..118268 | - | 1371 | WP_004178055 | conjugal transfer pilus assembly protein TraH | traH |
| NB668_RS28675 (NB668_28670) | 118255..118683 | - | 429 | WP_004152689 | hypothetical protein | - |
| NB668_RS28680 (NB668_28675) | 118676..119248 | - | 573 | WP_004152688 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NB668_RS28685 (NB668_28680) | 119220..119459 | - | 240 | WP_004152687 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NB668_RS28690 (NB668_28685) | 119470..120222 | - | 753 | WP_004152686 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NB668_RS28695 (NB668_28690) | 120243..120569 | - | 327 | WP_004152685 | hypothetical protein | - |
| NB668_RS29235 | 120615..120800 | - | 186 | WP_004152684 | hypothetical protein | - |
| NB668_RS28700 (NB668_28695) | 120797..121033 | - | 237 | WP_004152683 | conjugal transfer protein TrbE | - |
| NB668_RS28705 (NB668_28700) | 121065..123020 | - | 1956 | WP_004153093 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NB668_RS28710 (NB668_28705) | 123068..123706 | - | 639 | WP_004152682 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NB668_RS28715 (NB668_28710) | 123719..124678 | - | 960 | WP_015065634 | conjugal transfer pilus assembly protein TraU | traU |
| NB668_RS28720 (NB668_28715) | 124722..125348 | - | 627 | WP_004152590 | type-F conjugative transfer system protein TraW | traW |
| NB668_RS28725 (NB668_28720) | 125348..125737 | - | 390 | WP_004152591 | type-F conjugative transfer system protein TrbI | - |
| NB668_RS28730 (NB668_28725) | 125737..128376 | - | 2640 | WP_004152592 | type IV secretion system protein TraC | virb4 |
| NB668_RS28735 (NB668_28730) | 128448..128846 | - | 399 | WP_004153071 | hypothetical protein | - |
| NB668_RS28740 (NB668_28735) | 129142..129546 | - | 405 | WP_004152594 | hypothetical protein | - |
| NB668_RS28745 (NB668_28740) | 129613..129930 | - | 318 | WP_004152595 | hypothetical protein | - |
| NB668_RS28750 (NB668_28745) | 129931..130149 | - | 219 | WP_004171484 | hypothetical protein | - |
| NB668_RS28755 (NB668_28750) | 130173..130463 | - | 291 | WP_004152596 | hypothetical protein | - |
| NB668_RS28760 (NB668_28755) | 130468..130878 | - | 411 | WP_004152597 | lipase chaperone | - |
| NB668_RS28765 (NB668_28760) | 131010..131579 | - | 570 | WP_004152598 | type IV conjugative transfer system lipoprotein TraV | traV |
| NB668_RS28770 (NB668_28765) | 131602..132198 | - | 597 | WP_004152599 | conjugal transfer pilus-stabilizing protein TraP | - |
| NB668_RS28775 (NB668_28770) | 132191..133615 | - | 1425 | WP_250825007 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NB668_RS28780 (NB668_28775) | 133615..134355 | - | 741 | WP_004152601 | type-F conjugative transfer system secretin TraK | traK |
| NB668_RS28785 (NB668_28780) | 134342..134908 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| NB668_RS28790 (NB668_28785) | 134928..135233 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| NB668_RS28795 (NB668_28790) | 135247..135615 | - | 369 | WP_004178060 | type IV conjugative transfer system pilin TraA | - |
| NB668_RS28800 (NB668_28795) | 135669..136040 | - | 372 | WP_004208838 | TraY domain-containing protein | - |
| NB668_RS28805 (NB668_28800) | 136124..136819 | - | 696 | WP_004178061 | transcriptional regulator TraJ family protein | - |
| NB668_RS28810 (NB668_28805) | 137033..137425 | - | 393 | WP_004178062 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NB668_RS28815 (NB668_28810) | 137859..138344 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| NB668_RS28820 (NB668_28815) | 138377..138706 | - | 330 | WP_047066474 | DUF5983 family protein | - |
| NB668_RS28825 (NB668_28820) | 138739..139560 | - | 822 | WP_004178064 | DUF932 domain-containing protein | - |
| NB668_RS28830 (NB668_28825) | 140394..140807 | - | 414 | WP_004152722 | helix-turn-helix domain-containing protein | - |
| NB668_RS28835 (NB668_28830) | 140808..141086 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| NB668_RS28840 (NB668_28835) | 141076..141396 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NB668_RS28845 (NB668_28840) | 141477..141701 | - | 225 | WP_004152719 | hypothetical protein | - |
| NB668_RS28850 (NB668_28845) | 141712..141924 | - | 213 | WP_004152718 | hypothetical protein | - |
| NB668_RS28855 (NB668_28850) | 141985..142341 | - | 357 | WP_004152717 | hypothetical protein | - |
| NB668_RS28860 (NB668_28855) | 142977..143327 | - | 351 | WP_004152758 | hypothetical protein | - |