T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 11336..22013
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RD110_RS26985 (RD110_26985) | 6552..6767 | - | 216 | WP_021561443 | antitoxin MazE family protein | - |
| RD110_RS26990 (RD110_26990) | 7056..7811 | + | 756 | WP_232476757 | recombinase family protein | - |
| RD110_RS26995 (RD110_26995) | 7813..8487 | - | 675 | WP_011178411 | DNA methylase | - |
| RD110_RS27000 (RD110_27000) | 8642..9073 | - | 432 | WP_001665065 | OmpA family protein | - |
| RD110_RS27005 (RD110_27005) | 9089..9787 | - | 699 | WP_011114053 | TraX family protein | - |
| RD110_RS27010 (RD110_27010) | 9787..10053 | - | 267 | WP_010890140 | hypothetical protein | - |
| RD110_RS27015 (RD110_27015) | 10082..10717 | - | 636 | WP_011114052 | transglycosylase SLT domain-containing protein | - |
| RD110_RS27020 (RD110_27020) | 10731..11318 | - | 588 | WP_010890138 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| RD110_RS27025 (RD110_27025) | 11336..13054 | - | 1719 | WP_011114051 | P-type conjugative transfer protein TrbL | virB6 |
| RD110_RS27030 (RD110_27030) | 13065..13292 | - | 228 | WP_000644148 | entry exclusion lipoprotein TrbK | - |
| RD110_RS27035 (RD110_27035) | 13302..14066 | - | 765 | WP_010890135 | P-type conjugative transfer protein TrbJ | virB5 |
| RD110_RS27040 (RD110_27040) | 14087..15508 | - | 1422 | WP_011114050 | TrbI/VirB10 family protein | virB10 |
| RD110_RS27045 (RD110_27045) | 15513..16001 | - | 489 | WP_006122479 | conjugal transfer protein TrbH | - |
| RD110_RS27050 (RD110_27050) | 16004..16903 | - | 900 | WP_006122480 | P-type conjugative transfer protein TrbG | virB9 |
| RD110_RS27055 (RD110_27055) | 16921..17703 | - | 783 | WP_006122481 | conjugal transfer protein TrbF | virB8 |
| RD110_RS27060 (RD110_27060) | 17700..20258 | - | 2559 | WP_011114047 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| RD110_RS27065 (RD110_27065) | 20255..20566 | - | 312 | WP_001207961 | conjugal transfer protein TrbD | virB3 |
| RD110_RS27070 (RD110_27070) | 20570..21034 | - | 465 | WP_011114046 | conjugal transfer system pilin TrbC | virB2 |
| RD110_RS27075 (RD110_27075) | 21051..22013 | - | 963 | WP_000132020 | P-type conjugative transfer ATPase TrbB | virB11 |
| RD110_RS27080 (RD110_27080) | 22323..22685 | - | 363 | WP_010890126 | transcriptional regulator | - |
| RD110_RS27085 (RD110_27085) | 22799..23140 | + | 342 | WP_000019167 | single-stranded DNA-binding protein | - |
| RD110_RS27090 (RD110_27090) | 23187..24407 | + | 1221 | WP_011114072 | plasmid replication initiator TrfA | - |
| RD110_RS27105 (RD110_27105) | 25730..26044 | - | 315 | WP_011117139 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| RD110_RS27110 (RD110_27110) | 26041..26310 | - | 270 | WP_001260984 | type II toxin-antitoxin system ParD family antitoxin | - |
| RD110_RS27115 (RD110_27115) | 26479..26907 | + | 429 | WP_001095942 | antirestriction protein | - |